Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR1263-201ENST00000408324 86 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 MIR3152-201ENST00000579801 74 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 AL359881.1-201ENST00000602916 267 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 AC021443.1-201ENST00000604478 211 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 AC021613.1-201ENST00000623880 111 ntBASIC1.3□□□□□ -2.2
CLIP4Q8N3C7 RNA5SP205-201ENST00000364653 136 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 SNORD58C-201ENST00000365223 64 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RNU6-747P-201ENST00000390928 104 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RNU6-241P-201ENST00000391148 104 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RNU6-177P-201ENST00000411257 104 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 RNU7-164P-201ENST00000459221 62 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 Y_RNA.712-201ENST00000517011 92 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 MIR548AO-201ENST00000579992 96 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 MIR4303-201ENST00000581299 66 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 MIR4305-201ENST00000583252 102 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 AL020996.3-201ENST00000606617 222 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 MIR8055-201ENST00000610739 97 ntBASIC1.29□□□□□ -2.2
CLIP4Q8N3C7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 RNA5SP261-201ENST00000410536 106 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 HMGN1P33-201ENST00000432945 451 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 AC025166.1-201ENST00000612411 163 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 MIR6717-201ENST00000622747 73 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
CLIP4Q8N3C7 SNORA1.1-201ENST00000364671 133 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 SNORA67.5-201ENST00000391036 107 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 SNORA26.6-201ENST00000391256 115 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 RNA5SP144-201ENST00000410846 116 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 AL603825.1-201ENST00000438481 80 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 AP000942.3-201ENST00000603702 160 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 AL121890.5-201ENST00000620848 304 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 MIR3914-2-201ENST00000637339 95 ntBASIC1.27□□□□□ -2.21
CLIP4Q8N3C7 RNU6-1290P-201ENST00000362957 109 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 RNA5SP48-201ENST00000363969 126 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 RNU2-35P-201ENST00000516446 142 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 RNY4P20-201ENST00000516678 93 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 MTND5P18-201ENST00000445624 1801 ntBASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLIP4Q8N3C7 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 RNA5SP136-201ENST00000410906 107 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 AL022718.1-201ENST00000412004 84 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 RPS3AP1-201ENST00000413190 320 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 RNU6-893P-201ENST00000458841 100 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 snoU13.25-201ENST00000458945 104 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 RNU7-123P-201ENST00000515911 60 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CLIP4Q8N3C7 SNORA22.1-201ENST00000362701 134 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 AL512326.2-201ENST00000426359 151 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 U6.95-201ENST00000636931 70 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 Z97988.1-201ENST00000637697 135 ntBASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
CLIP4Q8N3C7 AC090844.1-201ENST00000422019 156 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 CYP3A52P-201ENST00000563326 91 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 MIR6841-201ENST00000637129 72 ntBASIC1.23□□□□□ -2.21
CLIP4Q8N3C7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.353-201ENST00000365440 108 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 Y_RNA.531-201ENST00000384589 121 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 SNORD38B-201ENST00000384690 67 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 RNU6-1104P-201ENST00000384723 104 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 MIR1302-7-201ENST00000408841 72 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 RNU6-735P-201ENST00000410612 107 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 RNU6-602P-201ENST00000411155 105 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 RNU7-113P-201ENST00000459273 62 ntBASIC1.22□□□□□ -2.21
CLIP4Q8N3C7 COX6CP6-201ENST00000490840 228 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms