Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR6717-201ENST00000622747 73 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 MIR6844-201ENST00000637122 62 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 SNORA1.1-201ENST00000364671 133 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 UBL5P1-201ENST00000507979 193 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 MIR4264-201ENST00000583520 66 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 AC098479.1-201ENST00000609225 154 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 MIR6841-201ENST00000637129 72 ntBASIC1.25□□□□□ -2.21
PPP4R4Q6NUP7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 SNORD113.3-201ENST00000364630 78 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.454-201ENST00000384224 113 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 SNORA2B-201ENST00000384583 137 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-747P-201ENST00000390928 104 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-241P-201ENST00000391148 104 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-177P-201ENST00000411257 104 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 snoU13.21-201ENST00000459368 105 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 MIR4661-201ENST00000582720 75 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 AC104465.1-201ENST00000611365 139 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 MIR6740-201ENST00000618268 113 ntBASIC1.24□□□□□ -2.21
PPP4R4Q6NUP7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 MIR302B-201ENST00000362188 73 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 RNU1-133P-201ENST00000364867 167 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-804P-201ENST00000384286 107 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.580-201ENST00000391004 95 ntBASIC1.23□□□□□ -2.21
PPP4R4Q6NUP7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 MIR942-201ENST00000401111 86 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 RNU7-197P-201ENST00000458836 62 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 AP000753.3-201ENST00000604083 169 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 AC021613.1-201ENST00000623880 111 ntBASIC1.22□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-349P-201ENST00000362402 107 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 SNORD12C-201ENST00000386307 89 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 PDCD5P2-201ENST00000507570 312 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 MIR3144-201ENST00000579460 79 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 MIR8070-201ENST00000616510 88 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
PPP4R4Q6NUP7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-508P-201ENST00000363231 103 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 RNU4-11P-201ENST00000365287 132 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 MIR563-201ENST00000385080 79 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 RPS3AP1-201ENST00000413190 320 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 POLR2J4-204ENST00000418424 324 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
PPP4R4Q6NUP7 RNU4-16P-201ENST00000364737 141 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 SNORD116-18-201ENST00000383961 92 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 RNU7-62P-201ENST00000458856 62 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 MTND5P41-201ENST00000517498 206 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.19□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RNU1-36P-201ENST00000365130 165 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.398-201ENST00000383952 99 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RNY1P6-201ENST00000384193 109 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 snoU13.2-201ENST00000459201 104 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RNU7-70P-201ENST00000516941 66 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 AC112693.2-201ENST00000556538 232 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.778-201ENST00000620203 90 ntBASIC1.18□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-151P-201ENST00000364158 107 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-449P-201ENST00000383914 107 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 MIR588-201ENST00000384900 83 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 SNORD37.2-201ENST00000391075 66 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.17□□□□□ -2.22
PPP4R4Q6NUP7 SNORA22.1-201ENST00000362701 134 ntBASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 RNA5SP261-201ENST00000410536 106 ntBASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 MIR3668-201ENST00000582138 75 ntBASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 AC021753.1-201ENST00000635724 168 ntBASIC1.16□□□□□ -2.22
PPP4R4Q6NUP7 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
PPP4R4Q6NUP7 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
PPP4R4Q6NUP7 AC015818.7-201ENST00000428754 109 ntBASIC1.15□□□□□ -2.23
PPP4R4Q6NUP7 AC087499.7-201ENST00000441958 109 ntBASIC1.15□□□□□ -2.23
PPP4R4Q6NUP7 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
PPP4R4Q6NUP7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms