Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 Z83818.1-201ENST00000603584 150 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 RNU6-94P-201ENST00000607728 107 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 AC090425.1-201ENST00000610007 140 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 AC141273.2-201ENST00000618989 130 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 MIR376A2-201ENST00000636782 80 ntBASIC0.95□□□□□ -2.26
PDLIM3Q53GG5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AL442644.1-201ENST00000454390 3105 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 MIR302B-201ENST00000362188 73 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 RNU6-275P-201ENST00000364910 107 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 RNU6-913P-201ENST00000390913 95 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AC090844.1-201ENST00000422019 156 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AL035398.1-201ENST00000430869 322 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 RNU7-45P-201ENST00000459460 63 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 RNU2-13P-201ENST00000515909 113 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 RNU6-138P-201ENST00000515952 107 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AC097639.2-201ENST00000603159 172 ntBASIC0.94□□□□□ -2.26
PDLIM3Q53GG5 AL596211.1-201ENST00000569873 2277 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 Y_RNA.233-201ENST00000364407 101 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 RNU6-396P-201ENST00000365369 105 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 AP003716.2-201ENST00000528260 108 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 AP002392.1-201ENST00000537692 208 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 AC010487.4-201ENST00000637027 61 ntBASIC0.93□□□□□ -2.26
PDLIM3Q53GG5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 RNU6-716P-201ENST00000365621 103 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 RNU6-994P-201ENST00000410507 111 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 RNU4-43P-201ENST00000410628 137 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 AL392103.1-201ENST00000447000 198 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 snoU13.16-201ENST00000459350 104 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
PDLIM3Q53GG5 Y_RNA.75-201ENST00000362927 97 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 SNORD114-23-201ENST00000363536 72 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 RNU7-53P-201ENST00000516705 60 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 RNU7-70P-201ENST00000516941 66 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 MIR8087-201ENST00000612745 78 ntBASIC0.91□□□□□ -2.26
PDLIM3Q53GG5 RNU6-978P-201ENST00000364371 103 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 Y_RNA.257-201ENST00000364596 102 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 RNU6-200P-201ENST00000364743 107 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 MT-TG-201ENST00000387429 68 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 MIR548I3-201ENST00000408378 149 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 AC015818.7-201ENST00000428754 109 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 AC087499.7-201ENST00000441958 109 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 RNU6-998P-201ENST00000515894 101 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 RNU6-861P-201ENST00000516745 106 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 MRPS18CP4-201ENST00000535821 231 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 AP000753.3-201ENST00000604083 169 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.9□□□□□ -2.27
PDLIM3Q53GG5 SNORA25.7-201ENST00000364375 127 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 SNORA1.1-201ENST00000364671 133 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 RNU7-96P-201ENST00000459535 64 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 MIR4431-201ENST00000579990 94 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 MIR5197-201ENST00000583721 112 ntBASIC0.89□□□□□ -2.27
PDLIM3Q53GG5 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 Y_RNA.357-201ENST00000365487 109 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 SNORA24-201ENST00000384096 131 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 RNU6-768P-201ENST00000384683 107 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 SNORD89-201ENST00000390981 114 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 snoU13.21-201ENST00000459368 105 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.88□□□□□ -2.27
PDLIM3Q53GG5 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 RNU4-16P-201ENST00000364737 141 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 SNORD38B-201ENST00000384690 67 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 RNU7-73P-201ENST00000458743 63 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 AC107027.2-201ENST00000512197 115 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 RNU11-2P-201ENST00000516898 142 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 AL365205.2-201ENST00000594586 68 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 AC091932.4-201ENST00000623386 200 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 SNORD38B-202ENST00000625943 69 ntBASIC0.87□□□□□ -2.27
PDLIM3Q53GG5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 SNORD37.2-201ENST00000391075 66 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 SNORD83.1-201ENST00000411362 77 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 AC244023.1-201ENST00000426884 112 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 RNU7-80P-201ENST00000459562 61 ntBASIC0.86□□□□□ -2.27
PDLIM3Q53GG5 PDCD5P2-201ENST00000507570 312 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms