Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.95□□□□□ -2.56
RFX7Q2KHR2 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.95□□□□□ -2.56
RFX7Q2KHR2 MIR3115-201ENST00000577915 68 ntBASIC-0.95□□□□□ -2.56
RFX7Q2KHR2 MTND5P18-201ENST00000445624 1801 ntBASIC-0.95□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNY3P3-201ENST00000363816 102 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORD114-3-201ENST00000364969 75 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORD24-201ENST00000383884 75 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORD64-201ENST00000386683 67 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-908P-201ENST00000410160 94 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-373P-201ENST00000411247 98 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 uc_338.10-201ENST00000621872 182 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNA5SP133-201ENST00000363368 119 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-593P-201ENST00000364716 112 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNY1P13-201ENST00000365030 105 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORA72.4-201ENST00000384174 132 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORD61-201ENST00000384252 73 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 SNORA18-201ENST00000384416 132 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU4-70P-201ENST00000384579 139 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 MIR1207-201ENST00000408249 87 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-126P-201ENST00000516685 103 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU7-188P-201ENST00000517063 64 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-365P-201ENST00000517113 106 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 MIR548H5-201ENST00000580314 60 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 AC093424.1-201ENST00000604999 338 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 PISRT1.1-201ENST00000616930 107 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 U4.2-201ENST00000618561 85 ntBASIC-0.96□□□□□ -2.56
RFX7Q2KHR2 RNU6-451P-201ENST00000362921 107 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 SNORD115-44-201ENST00000365391 82 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU6-431P-201ENST00000383874 107 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU6-144P-201ENST00000383951 107 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR9-2-201ENST00000384838 87 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU2-14P-201ENST00000411053 191 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 AL160004.2-201ENST00000432935 350 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 AC010655.3-201ENST00000478818 450 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 AC144568.1-201ENST00000520139 137 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR4306-201ENST00000583390 91 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.97□□□□□ -2.57
RFX7Q2KHR2 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU6-865P-201ENST00000364772 107 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU6-831P-201ENST00000384548 107 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 AF228730.3-201ENST00000436691 102 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU7-74P-201ENST00000459104 62 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU7-80P-201ENST00000459562 61 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNA5SP461-201ENST00000516451 104 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 MIR3145-201ENST00000580727 82 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 RNU7-10P-201ENST00000607194 63 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 AC090617.10-201ENST00000624308 134 ntBASIC-0.98□□□□□ -2.57
RFX7Q2KHR2 MIR365A-201ENST00000362260 87 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 RNU6-899P-201ENST00000363947 107 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 MIR548A2-201ENST00000384956 97 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 MIR181B2-201ENST00000385004 89 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 MTND5P5-201ENST00000503764 376 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 MIR6851-201ENST00000617060 67 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 U6.109-201ENST00000636749 87 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 MTND5P26-201ENST00000426018 1752 ntBASIC-0.99□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.27-201ENST00000362540 103 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 RNU6-888P-201ENST00000363010 101 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 SNORD114-29-201ENST00000364819 70 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.577-201ENST00000384794 101 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.605-201ENST00000410577 105 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.637-201ENST00000459424 114 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 SNORD77.4-201ENST00000516158 81 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 RNU6-706P-201ENST00000517229 104 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms