Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 RNU4-58P-201ENST00000363192 141 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 SNORD114-10-201ENST00000363409 72 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 MIR496-201ENST00000385226 102 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 RNA5SP237-201ENST00000410414 113 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.55□□□□□ -2.5
ABCA4P78363 RNU7-137P-201ENST00000516788 62 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.55□□□□□ -2.5
ABCA4P78363 MIR3145-201ENST00000580727 82 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 MIR5197-201ENST00000583721 112 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.55□□□□□ -2.5
ABCA4P78363 AL021707.8-201ENST00000609428 183 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.55□□□□□ -2.5
ABCA4P78363 AC133104.2-201ENST00000615272 193 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 MIR3674-201ENST00000636576 68 ntBASIC-0.55□□□□□ -2.5
ABCA4P78363 RNU6-845P-201ENST00000362578 103 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 SNORD115-27-201ENST00000364430 82 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 SNORA33.1-201ENST00000364957 130 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNY4P28-201ENST00000365281 93 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 SNORA72.4-201ENST00000384174 132 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNU6-606P-201ENST00000384721 111 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 AL590004.1-201ENST00000405321 300 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RPS3AP52-201ENST00000435639 297 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 MTATP6P13-201ENST00000438531 667 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 AC107399.1-201ENST00000451226 265 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNU7-113P-201ENST00000459273 62 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 SNORD123-201ENST00000459473 70 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNA5SP20-201ENST00000515976 84 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 YWHAEP2-201ENST00000580066 112 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 AL359881.1-201ENST00000602916 267 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 AC098479.1-201ENST00000609225 154 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.56□□□□□ -2.5
ABCA4P78363 RNU6-874P-201ENST00000362390 105 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-54P-201ENST00000365563 107 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORD61-201ENST00000384252 73 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORA20-201ENST00000384662 132 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR147A-201ENST00000385079 72 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC018880.2-201ENST00000414265 201 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MTND1P34-201ENST00000438556 671 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-274P-201ENST00000459566 107 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA4P78363 RPS29P25-201ENST00000481709 171 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC010598.1-201ENST00000510378 103 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORD36C-201ENST00000516733 66 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR3941-201ENST00000582572 103 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR3123-201ENST00000583417 75 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC008507.4-201ENST00000585464 127 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC092954.2-201ENST00000609103 430 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNA5SP403-201ENST00000363598 108 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORD115-28-201ENST00000363931 81 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-484P-201ENST00000384016 107 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-842P-201ENST00000384269 107 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR204-201ENST00000385200 110 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR507-201ENST00000385234 94 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-258P-201ENST00000390884 101 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORD77.3-201ENST00000391113 65 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AL354751.2-201ENST00000415471 210 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA4P78363 MTCO2P21-201ENST00000419780 677 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AF228730.4-201ENST00000421457 183 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA4P78363 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.57□□□□□ -2.5
ABCA4P78363 SNORA19.3-201ENST00000516165 130 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU2-35P-201ENST00000516446 142 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 RNU6-980P-201ENST00000516925 103 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MTND4P7-201ENST00000523876 130 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 Z84480.1-201ENST00000605131 311 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 MIR548AY-201ENST00000617669 107 ntBASIC-0.57□□□□□ -2.5
ABCA4P78363 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 RNU6-151P-201ENST00000364158 107 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 RNU6-268P-201ENST00000364174 107 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 SNORA26.4-201ENST00000391188 123 ntBASIC-0.58□□□□□ -2.5
ABCA4P78363 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 257 ms