Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORD56B-201ENST00000384713 71 ntBASIC-1.55□□□□□ -2.66
TPM4P67936 AL445193.1-201ENST00000441183 141 ntBASIC-1.55□□□□□ -2.66
TPM4P67936 RNU6-175P-201ENST00000516896 107 ntBASIC-1.55□□□□□ -2.66
TPM4P67936 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.55□□□□□ -2.66
TPM4P67936 MIR4280-201ENST00000582178 76 ntBASIC-1.55□□□□□ -2.66
TPM4P67936 MIR4636-201ENST00000582271 80 ntBASIC-1.55□□□□□ -2.66
TPM4P67936 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
TPM4P67936 RNU6-449P-201ENST00000383914 107 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 RNU6-763P-201ENST00000390865 106 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.56□□□□□ -2.66
TPM4P67936 MTND1P1-201ENST00000445453 368 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 AC021146.6-201ENST00000514659 117 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 MIR4473-201ENST00000583731 91 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 RNU7-10P-201ENST00000607194 63 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 AC021613.1-201ENST00000623880 111 ntBASIC-1.56□□□□□ -2.66
TPM4P67936 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 RNU6-21P-201ENST00000384710 107 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 AL603914.1-201ENST00000401964 204 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 RNU7-74P-201ENST00000459104 62 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 MIR4724-201ENST00000579485 89 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 uc_338.10-201ENST00000621872 182 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 AC138305.3-201ENST00000624988 240 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 MIR376A2-201ENST00000636782 80 ntBASIC-1.57□□□□□ -2.66
TPM4P67936 MIR599-201ENST00000385069 95 ntBASIC-1.58□□□□□ -2.66
TPM4P67936 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
TPM4P67936 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.58□□□□□ -2.66
TPM4P67936 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.58□□□□□ -2.66
TPM4P67936 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.58□□□□□ -2.66
TPM4P67936 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.58□□□□□ -2.66
TPM4P67936 AL669831.3-213ENST00000636676 183 ntBASIC-1.58□□□□□ -2.66
TPM4P67936 RNU1-141P-201ENST00000364623 158 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 SNORD114-29-201ENST00000364819 70 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 RNY1P2-201ENST00000364820 117 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 MIR204-201ENST00000385200 110 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 RNU6-191P-201ENST00000516295 94 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.59□□□□□ -2.66
TPM4P67936 MIR3920-201ENST00000581751 86 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 RNU6-86P-201ENST00000606534 107 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 AC013791.1-201ENST00000616619 62 ntBASIC-1.59□□□□□ -2.66
TPM4P67936 RNU4-36P-201ENST00000364294 144 ntBASIC-1.6□□□□□ -2.67
TPM4P67936 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.6□□□□□ -2.67
TPM4P67936 MTND1P14-201ENST00000427400 950 ntBASIC-1.6□□□□□ -2.67
TPM4P67936 RNU7-35P-201ENST00000517174 62 ntBASIC-1.6□□□□□ -2.67
TPM4P67936 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.6□□□□□ -2.67
TPM4P67936 SNORD63-201ENST00000384262 68 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 RNU4-70P-201ENST00000384579 139 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 AC097635.1-201ENST00000450678 155 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 AC074198.2-201ENST00000508153 258 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 AC098479.1-201ENST00000609225 154 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 MIR7111-201ENST00000619751 72 ntBASIC-1.61□□□□□ -2.67
TPM4P67936 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 MIR539-201ENST00000365690 78 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 SNORD83B-201ENST00000386745 93 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 RNU6-510P-201ENST00000391239 108 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 RNU6-758P-201ENST00000516292 89 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 SNORD38.3-201ENST00000516599 73 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 MIR5197-201ENST00000583721 112 ntBASIC-1.62□□□□□ -2.67
TPM4P67936 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 RNY3-201ENST00000365484 102 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 MIR635-201ENST00000384830 98 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 RNU6-721P-201ENST00000410155 105 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 RNU6-893P-201ENST00000458841 100 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 MIR6851-201ENST00000617060 67 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 AC069503.3-201ENST00000618674 145 ntBASIC-1.63□□□□□ -2.67
TPM4P67936 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.64□□□□□ -2.67
TPM4P67936 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.64□□□□□ -2.67
TPM4P67936 RNU6-429P-201ENST00000384582 108 ntBASIC-1.64□□□□□ -2.67
TPM4P67936 RNU4-63P-201ENST00000411313 118 ntBASIC-1.64□□□□□ -2.67
TPM4P67936 AC108676.2-201ENST00000605225 163 ntBASIC-1.64□□□□□ -2.67
TPM4P67936 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 RNY4P14-201ENST00000363656 96 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.65□□□□□ -2.67
TPM4P67936 AL500527.2-201ENST00000454105 95 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 TRAJ51-201ENST00000504127 63 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 RNU6-764P-201ENST00000516396 105 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 RNU6-314P-201ENST00000516574 104 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 AP001328.1-201ENST00000528550 176 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.65□□□□□ -2.67
TPM4P67936 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.65□□□□□ -2.67
TPM4P67936 SNORD114-25-201ENST00000363742 72 ntBASIC-1.66□□□□□ -2.68
TPM4P67936 RNU7-13P-201ENST00000516413 62 ntBASIC-1.66□□□□□ -2.68
TPM4P67936 MIR5692C2-201ENST00000577959 77 ntBASIC-1.66□□□□□ -2.68
TPM4P67936 VN1R91P-201ENST00000594377 169 ntBASIC-1.66□□□□□ -2.68
TPM4P67936 RNU6-937P-201ENST00000384325 106 ntBASIC-1.67□□□□□ -2.68
TPM4P67936 MIR7-2-201ENST00000384970 110 ntBASIC-1.67□□□□□ -2.68
TPM4P67936 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.67□□□□□ -2.68
TPM4P67936 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.67□□□□□ -2.68
TPM4P67936 RNU6-506P-201ENST00000516553 94 ntBASIC-1.67□□□□□ -2.68
TPM4P67936 SNORD115-44-201ENST00000365391 82 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 RNU6-900P-201ENST00000384498 102 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 RNU2-55P-201ENST00000411146 174 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms