Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SRP54P61011 MIR6717-201ENST00000622747 73 ntBASIC0.23□□□□□ -2.37
SRP54P61011 RNU6-653P-201ENST00000363074 106 ntBASIC0.22□□□□□ -2.37
SRP54P61011 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
SRP54P61011 SNORA26.6-201ENST00000391256 115 ntBASIC0.22□□□□□ -2.37
SRP54P61011 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
SRP54P61011 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
SRP54P61011 Y_RNA.535-201ENST00000384612 99 ntBASIC0.21□□□□□ -2.38
SRP54P61011 MIR616-201ENST00000385293 97 ntBASIC0.21□□□□□ -2.38
SRP54P61011 MIR1197-201ENST00000408818 88 ntBASIC0.21□□□□□ -2.38
SRP54P61011 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
SRP54P61011 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.21□□□□□ -2.38
SRP54P61011 SNRPGP8-201ENST00000454064 226 ntBASIC0.21□□□□□ -2.38
SRP54P61011 RNU7-80P-201ENST00000459562 61 ntBASIC0.21□□□□□ -2.38
SRP54P61011 SCARNA24.2-201ENST00000516968 130 ntBASIC0.21□□□□□ -2.38
SRP54P61011 MIR3678-201ENST00000578455 94 ntBASIC0.21□□□□□ -2.38
SRP54P61011 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
SRP54P61011 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
SRP54P61011 MIR342-201ENST00000362212 99 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.44-201ENST00000362676 108 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.115-201ENST00000363272 98 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.138-201ENST00000363462 102 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.153-201ENST00000363615 91 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.304-201ENST00000365011 112 ntBASIC0.2□□□□□ -2.38
SRP54P61011 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.454-201ENST00000384224 113 ntBASIC0.2□□□□□ -2.38
SRP54P61011 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.542-201ENST00000384641 111 ntBASIC0.2□□□□□ -2.38
SRP54P61011 RNU6-1228P-201ENST00000391014 107 ntBASIC0.2□□□□□ -2.38
SRP54P61011 MTND5P22-201ENST00000458380 195 ntBASIC0.2□□□□□ -2.38
SRP54P61011 SNORD2.1-201ENST00000458762 69 ntBASIC0.2□□□□□ -2.38
SRP54P61011 MIR3171-201ENST00000584270 74 ntBASIC0.2□□□□□ -2.38
SRP54P61011 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
SRP54P61011 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
SRP54P61011 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
SRP54P61011 Y_RNA.42-201ENST00000362660 108 ntBASIC0.19□□□□□ -2.38
SRP54P61011 RNA5SP457-201ENST00000363657 124 ntBASIC0.19□□□□□ -2.38
SRP54P61011 Y_RNA.351-201ENST00000365436 96 ntBASIC0.19□□□□□ -2.38
SRP54P61011 Y_RNA.430-201ENST00000384081 110 ntBASIC0.19□□□□□ -2.38
SRP54P61011 SNORD93-201ENST00000408813 74 ntBASIC0.19□□□□□ -2.38
SRP54P61011 Y_RNA.622-201ENST00000411091 108 ntBASIC0.19□□□□□ -2.38
SRP54P61011 MIR4431-201ENST00000579990 94 ntBASIC0.19□□□□□ -2.38
SRP54P61011 SNORA25.18-201ENST00000607153 114 ntBASIC0.19□□□□□ -2.38
SRP54P61011 AP001282.2-201ENST00000616149 309 ntBASIC0.19□□□□□ -2.38
SRP54P61011 MIR8066-201ENST00000617280 78 ntBASIC0.19□□□□□ -2.38
SRP54P61011 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
SRP54P61011 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.82-201ENST00000363000 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.92-201ENST00000363043 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.117-201ENST00000363294 101 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.235-201ENST00000364412 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNU4-67P-201ENST00000364569 141 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNU6-740P-201ENST00000364734 105 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.306-201ENST00000365015 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.312-201ENST00000365089 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.322-201ENST00000365151 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 SNORA1-201ENST00000384107 130 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
SRP54P61011 MT-TT-201ENST00000387460 66 ntBASIC0.18□□□□□ -2.38
SRP54P61011 AL606845.1-201ENST00000404881 255 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNA5SP237-201ENST00000410414 113 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNU4-83P-201ENST00000410863 133 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RPL39P25-201ENST00000449384 154 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.650-201ENST00000459002 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.777-201ENST00000516982 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 MIR5197-201ENST00000583721 112 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.771-201ENST00000598668 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 AL662814.1-201ENST00000617364 121 ntBASIC0.18□□□□□ -2.38
SRP54P61011 Y_RNA.789-201ENST00000622480 102 ntBASIC0.18□□□□□ -2.38
SRP54P61011 RNU6-1099P-201ENST00000363533 107 ntBASIC0.17□□□□□ -2.38
SRP54P61011 Y_RNA.199-201ENST00000364014 102 ntBASIC0.17□□□□□ -2.38
SRP54P61011 Y_RNA.202-201ENST00000364083 110 ntBASIC0.17□□□□□ -2.38
SRP54P61011 Y_RNA.216-201ENST00000364205 93 ntBASIC0.17□□□□□ -2.38
SRP54P61011 RNU5E-4P-201ENST00000364931 120 ntBASIC0.17□□□□□ -2.38
SRP54P61011 RNU6-597P-201ENST00000365620 102 ntBASIC0.17□□□□□ -2.38
SRP54P61011 RNU7-45P-201ENST00000459460 63 ntBASIC0.17□□□□□ -2.38
SRP54P61011 RNU6-469P-201ENST00000516253 101 ntBASIC0.17□□□□□ -2.38
SRP54P61011 AC020661.2-201ENST00000560114 134 ntBASIC0.17□□□□□ -2.38
SRP54P61011 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
SRP54P61011 MIR3152-201ENST00000579801 74 ntBASIC0.17□□□□□ -2.38
SRP54P61011 Y_RNA.23-201ENST00000362496 106 ntBASIC0.16□□□□□ -2.38
SRP54P61011 Y_RNA.61-201ENST00000362835 102 ntBASIC0.16□□□□□ -2.38
SRP54P61011 SNORA36.1-201ENST00000363424 132 ntBASIC0.16□□□□□ -2.38
SRP54P61011 snoU2_19.4-201ENST00000364329 80 ntBASIC0.16□□□□□ -2.38
SRP54P61011 RNU6-1292P-201ENST00000383856 107 ntBASIC0.16□□□□□ -2.38
SRP54P61011 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
SRP54P61011 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SRP54P61011 RNU6-651P-201ENST00000411040 105 ntBASIC0.16□□□□□ -2.38
SRP54P61011 RNU6-1137P-201ENST00000517073 99 ntBASIC0.16□□□□□ -2.38
SRP54P61011 U2.14-201ENST00000615943 113 ntBASIC0.16□□□□□ -2.38
SRP54P61011 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
SRP54P61011 AL109933.3-201ENST00000619095 188 ntBASIC0.16□□□□□ -2.38
SRP54P61011 AC091932.4-201ENST00000623386 200 ntBASIC0.16□□□□□ -2.38
SRP54P61011 Y_RNA.618-201ENST00000410949 107 ntBASIC0.15□□□□□ -2.39
SRP54P61011 TRBVB-201ENST00000477100 408 ntBASIC0.15□□□□□ -2.39
SRP54P61011 RNU6-453P-201ENST00000516819 85 ntBASIC0.15□□□□□ -2.39
SRP54P61011 RNU6-570P-201ENST00000517051 105 ntBASIC0.15□□□□□ -2.39
SRP54P61011 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.15□□□□□ -2.39
SRP54P61011 SNORA79-201ENST00000408376 140 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms