Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
RTP1P59025 SNORD3E-202ENST00000627253 216 ntBASIC2.24□□□□□ -2.05
RTP1P59025 MIR6841-201ENST00000637129 72 ntBASIC2.24□□□□□ -2.05
RTP1P59025 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RTP1P59025 SNORA22.1-201ENST00000362701 134 ntBASIC2.23□□□□□ -2.05
RTP1P59025 SNORD115-2-201ENST00000362842 82 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNU6-363P-201ENST00000362895 105 ntBASIC2.23□□□□□ -2.05
RTP1P59025 SNORD115-20-201ENST00000365099 82 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
RTP1P59025 Y_RNA.470-201ENST00000384307 117 ntBASIC2.23□□□□□ -2.05
RTP1P59025 Y_RNA.507-201ENST00000384500 99 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNU6-913P-201ENST00000390913 95 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNU4-69P-201ENST00000410677 143 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNA5SP270-201ENST00000411361 118 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNU6-893P-201ENST00000458841 100 ntBASIC2.23□□□□□ -2.05
RTP1P59025 RNA5SP445-201ENST00000515889 115 ntBASIC2.23□□□□□ -2.05
RTP1P59025 MIR3152-201ENST00000579801 74 ntBASIC2.23□□□□□ -2.05
RTP1P59025 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
RTP1P59025 AC243994.1-201ENST00000618627 109 ntBASIC2.23□□□□□ -2.05
RTP1P59025 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RTP1P59025 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RTP1P59025 RNY3P2-201ENST00000362918 102 ntBASIC2.22□□□□□ -2.05
RTP1P59025 Y_RNA.93-201ENST00000363066 109 ntBASIC2.22□□□□□ -2.05
RTP1P59025 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNU4-36P-201ENST00000364294 144 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNA5SP190-201ENST00000365222 118 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
RTP1P59025 MIR499A-201ENST00000384903 122 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNA5SP100-201ENST00000410903 110 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNA5SP59-201ENST00000410922 110 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RPS3AP1-201ENST00000413190 320 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNU7-73P-201ENST00000458743 63 ntBASIC2.22□□□□□ -2.05
RTP1P59025 SNORD13-201ENST00000459299 104 ntBASIC2.22□□□□□ -2.05
RTP1P59025 SCARNA23-201ENST00000516060 130 ntBASIC2.22□□□□□ -2.05
RTP1P59025 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.22□□□□□ -2.05
RTP1P59025 RNU6-762P-201ENST00000517107 102 ntBASIC2.22□□□□□ -2.05
RTP1P59025 MIR4791-201ENST00000607666 84 ntBASIC2.22□□□□□ -2.05
RTP1P59025 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.22□□□□□ -2.05
RTP1P59025 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.22□□□□□ -2.05
RTP1P59025 MIR2052-201ENST00000636055 55 ntBASIC2.22□□□□□ -2.05
RTP1P59025 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
RTP1P59025 Y_RNA.107-201ENST00000363190 121 ntBASIC2.21□□□□□ -2.06
RTP1P59025 Y_RNA.155-201ENST00000363632 101 ntBASIC2.21□□□□□ -2.06
RTP1P59025 RNU4-67P-201ENST00000364569 141 ntBASIC2.21□□□□□ -2.06
RTP1P59025 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
RTP1P59025 Y_RNA.558-201ENST00000384685 113 ntBASIC2.21□□□□□ -2.06
RTP1P59025 MIR605-201ENST00000385078 83 ntBASIC2.21□□□□□ -2.06
RTP1P59025 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
RTP1P59025 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
RTP1P59025 MIR1270-201ENST00000459320 83 ntBASIC2.21□□□□□ -2.06
RTP1P59025 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
RTP1P59025 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.21□□□□□ -2.06
RTP1P59025 DNAJC19P9-201ENST00000555084 351 ntBASIC2.21□□□□□ -2.06
RTP1P59025 AL020996.3-201ENST00000606617 222 ntBASIC2.21□□□□□ -2.06
RTP1P59025 MALAT1.1-201ENST00000618249 95 ntBASIC2.21□□□□□ -2.06
RTP1P59025 MIR6717-201ENST00000622747 73 ntBASIC2.21□□□□□ -2.06
RTP1P59025 Y_RNA.220-201ENST00000364244 109 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
RTP1P59025 Y_RNA.360-201ENST00000365512 102 ntBASIC2.2□□□□□ -2.06
RTP1P59025 Y_RNA.430-201ENST00000384081 110 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNU6-409P-201ENST00000384114 104 ntBASIC2.2□□□□□ -2.06
RTP1P59025 Y_RNA.466-201ENST00000384294 113 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNU6-733P-201ENST00000410759 104 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNA5SP450-201ENST00000411206 102 ntBASIC2.2□□□□□ -2.06
RTP1P59025 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNA5SP33-201ENST00000516687 98 ntBASIC2.2□□□□□ -2.06
RTP1P59025 RNU6-844P-201ENST00000517175 102 ntBASIC2.2□□□□□ -2.06
RTP1P59025 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
RTP1P59025 MIR548AE2-201ENST00000583456 67 ntBASIC2.2□□□□□ -2.06
RTP1P59025 FAM106DP-201ENST00000586416 501 ntBASIC2.2□□□□□ -2.06
RTP1P59025 AL442128.1-201ENST00000615151 90 ntBASIC2.2□□□□□ -2.06
RTP1P59025 U1.36-201ENST00000620684 176 ntBASIC2.2□□□□□ -2.06
RTP1P59025 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTP1P59025 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTP1P59025 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTP1P59025 WWP1P1-201ENST00000466609 2769 ntBASIC2.19□□□□□ -2.06
RTP1P59025 Y_RNA.342-201ENST00000365352 113 ntBASIC2.19□□□□□ -2.06
RTP1P59025 MIR577-201ENST00000385196 96 ntBASIC2.19□□□□□ -2.06
RTP1P59025 Y_RNA.601-201ENST00000410500 113 ntBASIC2.19□□□□□ -2.06
RTP1P59025 RNA5SP261-201ENST00000410536 106 ntBASIC2.19□□□□□ -2.06
RTP1P59025 AL353813.1-201ENST00000440700 253 ntBASIC2.19□□□□□ -2.06
RTP1P59025 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
RTP1P59025 MIR4694-201ENST00000578534 80 ntBASIC2.19□□□□□ -2.06
RTP1P59025 AL359821.1-201ENST00000605519 182 ntBASIC2.19□□□□□ -2.06
RTP1P59025 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.19□□□□□ -2.06
RTP1P59025 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
RTP1P59025 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTP1P59025 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTP1P59025 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNY1P10-201ENST00000363268 113 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNU6-832P-201ENST00000363319 107 ntBASIC2.18□□□□□ -2.06
RTP1P59025 Y_RNA.388-201ENST00000383919 113 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNU6-616P-201ENST00000384353 107 ntBASIC2.18□□□□□ -2.06
RTP1P59025 Y_RNA.537-201ENST00000384626 109 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNY4P29-201ENST00000410801 97 ntBASIC2.18□□□□□ -2.06
RTP1P59025 AC003989.2-201ENST00000440224 169 ntBASIC2.18□□□□□ -2.06
RTP1P59025 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
RTP1P59025 SNORA25.15-201ENST00000516487 89 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms