Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
NPTX2P47972 MIR1263-201ENST00000408324 86 ntBASIC1.62□□□□□ -2.15
NPTX2P47972 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.62□□□□□ -2.15
NPTX2P47972 AC021443.1-201ENST00000604478 211 ntBASIC1.62□□□□□ -2.15
NPTX2P47972 AC025166.1-201ENST00000612411 163 ntBASIC1.62□□□□□ -2.15
NPTX2P47972 AC021613.1-201ENST00000623880 111 ntBASIC1.62□□□□□ -2.15
NPTX2P47972 Y_RNA.353-201ENST00000365440 108 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 RNU6-1190P-201ENST00000410811 104 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 RNY4P20-201ENST00000516678 93 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 U6.95-201ENST00000636931 70 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
NPTX2P47972 SNORA26.6-201ENST00000391256 115 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 Y_RNA.629-201ENST00000411368 105 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 RNU7-164P-201ENST00000459221 62 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 snoU13.16-201ENST00000459350 104 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 SNORD33.1-201ENST00000516213 88 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 MIR4305-201ENST00000583252 102 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 AL020996.3-201ENST00000606617 222 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 AL096861.1-201ENST00000610899 123 ntBASIC1.6□□□□□ -2.15
NPTX2P47972 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
NPTX2P47972 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NPTX2P47972 Y_RNA.273-201ENST00000364703 102 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 Y_RNA.298-201ENST00000364960 107 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 Y_RNA.528-201ENST00000384575 108 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU6-1319P-201ENST00000390855 104 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU6-747P-201ENST00000390928 104 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU6-241P-201ENST00000391148 104 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNA5SP144-201ENST00000410846 116 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNA5SP136-201ENST00000410906 107 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU6-177P-201ENST00000411257 104 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 BTF3P4-201ENST00000418852 495 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 RNU2-35P-201ENST00000516446 142 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 MIR3192-201ENST00000584920 77 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
NPTX2P47972 MTND5P18-201ENST00000445624 1801 ntBASIC1.59□□□□□ -2.16
NPTX2P47972 Y_RNA.346-201ENST00000365385 112 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 POLR2J4-204ENST00000418424 324 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 HMGN1P33-201ENST00000432945 451 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 RNU7-123P-201ENST00000515911 60 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 RNA5SP458-201ENST00000516188 119 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 MIR6717-201ENST00000622747 73 ntBASIC1.58□□□□□ -2.16
NPTX2P47972 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NPTX2P47972 RNU6-834P-201ENST00000362367 110 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 COX6CP6-201ENST00000490840 228 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 MIR548AO-201ENST00000579992 96 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 MIR8055-201ENST00000610739 97 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 MIR6841-201ENST00000637129 72 ntBASIC1.57□□□□□ -2.16
NPTX2P47972 RNA5SP48-201ENST00000363969 126 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 RNA5SP261-201ENST00000410536 106 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 RNU6-1064P-201ENST00000410626 104 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 RNU6-947P-201ENST00000516264 106 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 MIR3152-201ENST00000579801 74 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
NPTX2P47972 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 SNORA22.1-201ENST00000362701 134 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 RNU6-1056P-201ENST00000383996 107 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 RNU6-1144P-201ENST00000384247 104 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 RNU6-476P-201ENST00000384726 107 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 AL022718.1-201ENST00000412004 84 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 RNU6-1258P-201ENST00000516911 111 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 AC022523.2-201ENST00000561045 150 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 MTND5P34-201ENST00000568888 325 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 AL670379.3-201ENST00000605040 251 ntBASIC1.55□□□□□ -2.16
NPTX2P47972 SNORA1.1-201ENST00000364671 133 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 Y_RNA.430-201ENST00000384081 110 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 RNU6-1104P-201ENST00000384723 104 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 MIR548A3-201ENST00000385297 97 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 AC090844.1-201ENST00000422019 156 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 AL512326.2-201ENST00000426359 151 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 Y_RNA.649-201ENST00000459077 103 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 Z97988.1-201ENST00000637697 135 ntBASIC1.54□□□□□ -2.16
NPTX2P47972 Y_RNA.171-201ENST00000363760 102 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 Y_RNA.198-201ENST00000364013 98 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 RNU6-429P-201ENST00000384582 108 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 MT-TI-201ENST00000387365 69 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 RPL39P39-201ENST00000455840 151 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 AL512310.8-201ENST00000550183 120 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms