Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.299-201ENST00000364973 94 ntBASIC2.1□□□□□ -2.07
CCNFP41002 RNU4-69P-201ENST00000410677 143 ntBASIC2.1□□□□□ -2.07
CCNFP41002 Z98742.3-201ENST00000418637 326 ntBASIC2.1□□□□□ -2.07
CCNFP41002 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNFP41002 RNU6-537P-201ENST00000517277 103 ntBASIC2.1□□□□□ -2.07
CCNFP41002 CYP3A52P-201ENST00000563326 91 ntBASIC2.1□□□□□ -2.07
CCNFP41002 MIR548AO-201ENST00000579992 96 ntBASIC2.1□□□□□ -2.07
CCNFP41002 AC087741.2-201ENST00000619415 172 ntBASIC2.1□□□□□ -2.07
CCNFP41002 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.1□□□□□ -2.07
CCNFP41002 MIR6841-201ENST00000637129 72 ntBASIC2.1□□□□□ -2.07
CCNFP41002 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCNFP41002 SNORD77B-201ENST00000391112 67 ntBASIC2.09□□□□□ -2.07
CCNFP41002 AC245047.7-201ENST00000440265 293 ntBASIC2.09□□□□□ -2.07
CCNFP41002 snoU13.9-201ENST00000458927 103 ntBASIC2.09□□□□□ -2.07
CCNFP41002 AC108210.2-201ENST00000503681 201 ntBASIC2.09□□□□□ -2.07
CCNFP41002 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
CCNFP41002 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
CCNFP41002 AC141557.1-201ENST00000540982 400 ntBASIC2.09□□□□□ -2.07
CCNFP41002 AL162726.3-218ENST00000636401 95 ntBASIC2.09□□□□□ -2.07
CCNFP41002 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCNFP41002 Y_RNA.323-201ENST00000365157 109 ntBASIC2.08□□□□□ -2.08
CCNFP41002 Y_RNA.430-201ENST00000384081 110 ntBASIC2.08□□□□□ -2.08
CCNFP41002 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCNFP41002 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
CCNFP41002 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
CCNFP41002 Y_RNA.773-201ENST00000607168 90 ntBASIC2.08□□□□□ -2.08
CCNFP41002 MIR8055-201ENST00000610739 97 ntBASIC2.08□□□□□ -2.08
CCNFP41002 MIR1255B1-201ENST00000636325 63 ntBASIC2.08□□□□□ -2.08
CCNFP41002 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCNFP41002 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCNFP41002 Y_RNA.155-201ENST00000363632 101 ntBASIC2.07□□□□□ -2.08
CCNFP41002 Y_RNA.507-201ENST00000384500 99 ntBASIC2.07□□□□□ -2.08
CCNFP41002 SNORD41-201ENST00000386967 70 ntBASIC2.07□□□□□ -2.08
CCNFP41002 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
CCNFP41002 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
CCNFP41002 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.07□□□□□ -2.08
CCNFP41002 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
CCNFP41002 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
CCNFP41002 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
CCNFP41002 RNU6-766P-201ENST00000362478 107 ntBASIC2.06□□□□□ -2.08
CCNFP41002 RNU6-1113P-201ENST00000384348 107 ntBASIC2.06□□□□□ -2.08
CCNFP41002 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
CCNFP41002 HSPE1P24-201ENST00000450782 238 ntBASIC2.06□□□□□ -2.08
CCNFP41002 AC005908.1-201ENST00000468701 347 ntBASIC2.06□□□□□ -2.08
CCNFP41002 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNFP41002 Y_RNA.677-201ENST00000516401 85 ntBASIC2.06□□□□□ -2.08
CCNFP41002 AC019176.1-201ENST00000518519 225 ntBASIC2.06□□□□□ -2.08
CCNFP41002 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
CCNFP41002 MIR3198-2-201ENST00000577868 80 ntBASIC2.06□□□□□ -2.08
CCNFP41002 MIR3618-201ENST00000580330 88 ntBASIC2.06□□□□□ -2.08
CCNFP41002 SNORD115-2-201ENST00000362842 82 ntBASIC2.05□□□□□ -2.08
CCNFP41002 SNORD115-20-201ENST00000365099 82 ntBASIC2.05□□□□□ -2.08
CCNFP41002 Y_RNA.354-201ENST00000365448 111 ntBASIC2.05□□□□□ -2.08
CCNFP41002 RNU6-616P-201ENST00000384353 107 ntBASIC2.05□□□□□ -2.08
CCNFP41002 RNU6-1237P-201ENST00000384777 107 ntBASIC2.05□□□□□ -2.08
CCNFP41002 MIR1912-201ENST00000410389 80 ntBASIC2.05□□□□□ -2.08
CCNFP41002 SNORA7.5-201ENST00000410672 110 ntBASIC2.05□□□□□ -2.08
CCNFP41002 AC009474.2-201ENST00000451383 136 ntBASIC2.05□□□□□ -2.08
CCNFP41002 RNA5SP170-201ENST00000517150 101 ntBASIC2.05□□□□□ -2.08
CCNFP41002 RNU6-94P-201ENST00000607728 107 ntBASIC2.05□□□□□ -2.08
CCNFP41002 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
CCNFP41002 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CCNFP41002 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CCNFP41002 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CCNFP41002 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
CCNFP41002 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
CCNFP41002 Y_RNA.328-201ENST00000365208 113 ntBASIC2.04□□□□□ -2.08
CCNFP41002 RNU6-342P-201ENST00000384521 104 ntBASIC2.04□□□□□ -2.08
CCNFP41002 SNORA19.1-201ENST00000410656 129 ntBASIC2.04□□□□□ -2.08
CCNFP41002 RNU6-602P-201ENST00000411155 105 ntBASIC2.04□□□□□ -2.08
CCNFP41002 AC090844.1-201ENST00000422019 156 ntBASIC2.04□□□□□ -2.08
CCNFP41002 Y_RNA.676-201ENST00000516393 96 ntBASIC2.04□□□□□ -2.08
CCNFP41002 AL357312.1-201ENST00000603879 298 ntBASIC2.04□□□□□ -2.08
CCNFP41002 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
CCNFP41002 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.04□□□□□ -2.08
CCNFP41002 Z97988.1-201ENST00000637697 135 ntBASIC2.04□□□□□ -2.08
CCNFP41002 SNORA25.3-201ENST00000363205 127 ntBASIC2.03□□□□□ -2.08
CCNFP41002 RNU4-67P-201ENST00000364569 141 ntBASIC2.03□□□□□ -2.08
CCNFP41002 RNU6-409P-201ENST00000384114 104 ntBASIC2.03□□□□□ -2.08
CCNFP41002 SNORA18-201ENST00000384416 132 ntBASIC2.03□□□□□ -2.08
CCNFP41002 SNORD38B-201ENST00000384690 67 ntBASIC2.03□□□□□ -2.08
CCNFP41002 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
CCNFP41002 MIR3192-201ENST00000584920 77 ntBASIC2.03□□□□□ -2.08
CCNFP41002 AL096861.1-201ENST00000610899 123 ntBASIC2.03□□□□□ -2.08
CCNFP41002 GHRLOS.1-201ENST00000610995 70 ntBASIC2.03□□□□□ -2.08
CCNFP41002 SNORD38B-202ENST00000625943 69 ntBASIC2.03□□□□□ -2.08
CCNFP41002 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
CCNFP41002 SNORD115-19-201ENST00000363098 82 ntBASIC2.02□□□□□ -2.09
CCNFP41002 SNORD115-18-201ENST00000363293 82 ntBASIC2.02□□□□□ -2.09
CCNFP41002 RNA5SP48-201ENST00000363969 126 ntBASIC2.02□□□□□ -2.09
CCNFP41002 SNORD115-17-201ENST00000364612 82 ntBASIC2.02□□□□□ -2.09
CCNFP41002 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
CCNFP41002 RPL31P63-201ENST00000422565 375 ntBASIC2.02□□□□□ -2.09
CCNFP41002 AL591806.2-201ENST00000433122 173 ntBASIC2.02□□□□□ -2.09
CCNFP41002 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.02□□□□□ -2.09
CCNFP41002 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
CCNFP41002 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCNFP41002 RNU6-1298P-201ENST00000362456 101 ntBASIC2.01□□□□□ -2.09
CCNFP41002 MIR590-201ENST00000385008 97 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RNY4P30-201ENST00000410216 95 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms