Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU7-45P-201ENST00000459460 63 ntBASIC1.07□□□□□ -2.24
SHC1P29353 RNU7-80P-201ENST00000459562 61 ntBASIC1.07□□□□□ -2.24
SHC1P29353 AC107297.1-201ENST00000459991 176 ntBASIC1.07□□□□□ -2.24
SHC1P29353 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
SHC1P29353 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
SHC1P29353 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
SHC1P29353 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
SHC1P29353 Y_RNA.71-201ENST00000362892 104 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU1-133P-201ENST00000364867 167 ntBASIC1.06□□□□□ -2.24
SHC1P29353 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU6-1190P-201ENST00000410811 104 ntBASIC1.06□□□□□ -2.24
SHC1P29353 AL035398.1-201ENST00000430869 322 ntBASIC1.06□□□□□ -2.24
SHC1P29353 MTATP6P21-201ENST00000440681 189 ntBASIC1.06□□□□□ -2.24
SHC1P29353 AL158147.1-201ENST00000443970 75 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU7-107P-201ENST00000459121 61 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU7-96P-201ENST00000459535 64 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
SHC1P29353 RNU6-947P-201ENST00000516264 106 ntBASIC1.06□□□□□ -2.24
SHC1P29353 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
SHC1P29353 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
SHC1P29353 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
SHC1P29353 Y_RNA.366-201ENST00000365540 102 ntBASIC1.05□□□□□ -2.24
SHC1P29353 MIR539-201ENST00000365690 78 ntBASIC1.05□□□□□ -2.24
SHC1P29353 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
SHC1P29353 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
SHC1P29353 Y_RNA.757-201ENST00000578934 114 ntBASIC1.05□□□□□ -2.24
SHC1P29353 MIR3664-201ENST00000579074 99 ntBASIC1.05□□□□□ -2.24
SHC1P29353 MIR548AO-201ENST00000579992 96 ntBASIC1.05□□□□□ -2.24
SHC1P29353 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.05□□□□□ -2.24
SHC1P29353 MIR8055-201ENST00000610739 97 ntBASIC1.05□□□□□ -2.24
SHC1P29353 AL365222.1-201ENST00000614661 98 ntBASIC1.05□□□□□ -2.24
SHC1P29353 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.05□□□□□ -2.24
SHC1P29353 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHC1P29353 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SHC1P29353 Y_RNA.261-201ENST00000364631 102 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RNU6-80P-201ENST00000384195 107 ntBASIC1.04□□□□□ -2.24
SHC1P29353 Y_RNA.454-201ENST00000384224 113 ntBASIC1.04□□□□□ -2.24
SHC1P29353 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RNU6-1067P-201ENST00000384752 107 ntBASIC1.04□□□□□ -2.24
SHC1P29353 SNORA26.6-201ENST00000391256 115 ntBASIC1.04□□□□□ -2.24
SHC1P29353 Y_RNA.617-201ENST00000410920 90 ntBASIC1.04□□□□□ -2.24
SHC1P29353 Y_RNA.630-201ENST00000411370 108 ntBASIC1.04□□□□□ -2.24
SHC1P29353 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RNU7-73P-201ENST00000458743 63 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RN7SKP19-201ENST00000516016 252 ntBASIC1.04□□□□□ -2.24
SHC1P29353 SNORD111.1-201ENST00000516421 86 ntBASIC1.04□□□□□ -2.24
SHC1P29353 RNU7-70P-201ENST00000516941 66 ntBASIC1.04□□□□□ -2.24
SHC1P29353 AL512310.8-201ENST00000550183 120 ntBASIC1.04□□□□□ -2.24
SHC1P29353 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNU4-16P-201ENST00000364737 141 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNY1P6-201ENST00000384193 109 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNU6-22P-201ENST00000384355 107 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNU6-1117P-201ENST00000384525 104 ntBASIC1.03□□□□□ -2.24
SHC1P29353 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
SHC1P29353 AC090844.1-201ENST00000422019 156 ntBASIC1.03□□□□□ -2.24
SHC1P29353 snoU13.16-201ENST00000459350 104 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNU6-781P-201ENST00000516377 101 ntBASIC1.03□□□□□ -2.24
SHC1P29353 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
SHC1P29353 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SHC1P29353 MIR4251-201ENST00000635819 61 ntBASIC1.03□□□□□ -2.24
SHC1P29353 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
SHC1P29353 MIR302B-201ENST00000362188 73 ntBASIC1.02□□□□□ -2.25
SHC1P29353 Y_RNA.127-201ENST00000363386 109 ntBASIC1.02□□□□□ -2.25
SHC1P29353 RNU6-690P-201ENST00000365242 106 ntBASIC1.02□□□□□ -2.25
SHC1P29353 RNU6-659P-201ENST00000516454 104 ntBASIC1.02□□□□□ -2.25
SHC1P29353 RNU6-1258P-201ENST00000516911 111 ntBASIC1.02□□□□□ -2.25
SHC1P29353 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
SHC1P29353 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
SHC1P29353 PRELID3BP2-201ENST00000605362 201 ntBASIC1.02□□□□□ -2.25
SHC1P29353 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
SHC1P29353 AL137067.1-201ENST00000615933 120 ntBASIC1.02□□□□□ -2.25
SHC1P29353 MIR6717-201ENST00000622747 73 ntBASIC1.02□□□□□ -2.25
SHC1P29353 AC021613.1-201ENST00000623880 111 ntBASIC1.02□□□□□ -2.25
SHC1P29353 RNU6-647P-201ENST00000364243 107 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORD116-14-201ENST00000383894 92 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORD116-17-201ENST00000383929 92 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORD116-15-201ENST00000384445 92 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORD116-19-201ENST00000384729 92 ntBASIC1.01□□□□□ -2.25
SHC1P29353 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-1168P-201ENST00000390831 104 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-1319P-201ENST00000390855 104 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-747P-201ENST00000390928 104 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-241P-201ENST00000391148 104 ntBASIC1.01□□□□□ -2.25
SHC1P29353 MIR548I2-201ENST00000408348 149 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-177P-201ENST00000411257 104 ntBASIC1.01□□□□□ -2.25
SHC1P29353 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.01□□□□□ -2.25
SHC1P29353 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
SHC1P29353 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
SHC1P29353 RNU6-1333P-201ENST00000516162 93 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU2-35P-201ENST00000516446 142 ntBASIC1.01□□□□□ -2.25
SHC1P29353 RNU7-53P-201ENST00000516705 60 ntBASIC1.01□□□□□ -2.25
SHC1P29353 AP003716.2-201ENST00000528260 108 ntBASIC1.01□□□□□ -2.25
SHC1P29353 AC133485.4-201ENST00000561835 220 ntBASIC1.01□□□□□ -2.25
SHC1P29353 AC138907.4-201ENST00000570107 226 ntBASIC1.01□□□□□ -2.25
SHC1P29353 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
SHC1P29353 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
SHC1P29353 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1□□□□□ -2.25
SHC1P29353 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms