Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
ATF4P18848 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ATF4P18848 Y_RNA.330-201ENST00000365230 109 ntBASIC1.77□□□□□ -2.13
ATF4P18848 MIR548A3-201ENST00000385297 97 ntBASIC1.77□□□□□ -2.13
ATF4P18848 AL591704.2-201ENST00000421658 181 ntBASIC1.77□□□□□ -2.13
ATF4P18848 RNU6-1258P-201ENST00000516911 111 ntBASIC1.77□□□□□ -2.13
ATF4P18848 MIR1273D-201ENST00000577266 86 ntBASIC1.77□□□□□ -2.13
ATF4P18848 MIR3163-201ENST00000581592 73 ntBASIC1.77□□□□□ -2.13
ATF4P18848 SNORA80D-201ENST00000384488 135 ntBASIC1.76□□□□□ -2.13
ATF4P18848 MIR221-201ENST00000385135 110 ntBASIC1.76□□□□□ -2.13
ATF4P18848 RNU6-910P-201ENST00000390844 107 ntBASIC1.76□□□□□ -2.13
ATF4P18848 SNORA3.2-201ENST00000408221 125 ntBASIC1.76□□□□□ -2.13
ATF4P18848 RNA5SP237-201ENST00000410414 113 ntBASIC1.76□□□□□ -2.13
ATF4P18848 MRPL35P3-201ENST00000421557 364 ntBASIC1.76□□□□□ -2.13
ATF4P18848 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
ATF4P18848 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
ATF4P18848 AL670379.3-201ENST00000605040 251 ntBASIC1.76□□□□□ -2.13
ATF4P18848 RNU6-834P-201ENST00000362367 110 ntBASIC1.75□□□□□ -2.13
ATF4P18848 U8.2-201ENST00000363156 134 ntBASIC1.75□□□□□ -2.13
ATF4P18848 RNY4P6-201ENST00000363667 96 ntBASIC1.75□□□□□ -2.13
ATF4P18848 SNORD12C-201ENST00000386307 89 ntBASIC1.75□□□□□ -2.13
ATF4P18848 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.75□□□□□ -2.13
ATF4P18848 RNU4-69P-201ENST00000410677 143 ntBASIC1.75□□□□□ -2.13
ATF4P18848 AC244023.1-201ENST00000426884 112 ntBASIC1.75□□□□□ -2.13
ATF4P18848 RPS23P4-201ENST00000487908 423 ntBASIC1.75□□□□□ -2.13
ATF4P18848 AC242498.1-201ENST00000604134 111 ntBASIC1.75□□□□□ -2.13
ATF4P18848 MIR6132-201ENST00000622083 109 ntBASIC1.75□□□□□ -2.13
ATF4P18848 MIR6766-201ENST00000622641 72 ntBASIC1.75□□□□□ -2.13
ATF4P18848 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
ATF4P18848 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ATF4P18848 MIR377-201ENST00000362145 69 ntBASIC1.74□□□□□ -2.13
ATF4P18848 Y_RNA.470-201ENST00000384307 117 ntBASIC1.74□□□□□ -2.13
ATF4P18848 SNORD77B-201ENST00000391112 67 ntBASIC1.74□□□□□ -2.13
ATF4P18848 MIR1261-201ENST00000408659 82 ntBASIC1.74□□□□□ -2.13
ATF4P18848 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
ATF4P18848 Y_RNA.649-201ENST00000459077 103 ntBASIC1.74□□□□□ -2.13
ATF4P18848 AC022523.2-201ENST00000561045 150 ntBASIC1.74□□□□□ -2.13
ATF4P18848 MIR4648-201ENST00000580107 72 ntBASIC1.74□□□□□ -2.13
ATF4P18848 MIR5007-201ENST00000583098 95 ntBASIC1.74□□□□□ -2.13
ATF4P18848 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
ATF4P18848 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
ATF4P18848 RNU6-1056P-201ENST00000383996 107 ntBASIC1.73□□□□□ -2.13
ATF4P18848 SNORA18-201ENST00000384416 132 ntBASIC1.73□□□□□ -2.13
ATF4P18848 RNU6-1104P-201ENST00000384723 104 ntBASIC1.73□□□□□ -2.13
ATF4P18848 MIR222-201ENST00000384992 110 ntBASIC1.73□□□□□ -2.13
ATF4P18848 RNU6-205P-201ENST00000390858 107 ntBASIC1.73□□□□□ -2.13
ATF4P18848 snoU13.2-201ENST00000459201 104 ntBASIC1.73□□□□□ -2.13
ATF4P18848 snoU13.15-201ENST00000459407 104 ntBASIC1.73□□□□□ -2.13
ATF4P18848 SNORD33.1-201ENST00000516213 88 ntBASIC1.73□□□□□ -2.13
ATF4P18848 MTND5P34-201ENST00000568888 325 ntBASIC1.73□□□□□ -2.13
ATF4P18848 MIR6715A-201ENST00000615929 79 ntBASIC1.73□□□□□ -2.13
ATF4P18848 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
ATF4P18848 Y_RNA.353-201ENST00000365440 108 ntBASIC1.72□□□□□ -2.13
ATF4P18848 RNU6-1237P-201ENST00000384777 107 ntBASIC1.72□□□□□ -2.13
ATF4P18848 MIR588-201ENST00000384900 83 ntBASIC1.72□□□□□ -2.13
ATF4P18848 MIR504-201ENST00000385065 83 ntBASIC1.72□□□□□ -2.13
ATF4P18848 RN7SKP223-201ENST00000410582 62 ntBASIC1.72□□□□□ -2.13
ATF4P18848 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.72□□□□□ -2.13
ATF4P18848 RNU7-62P-201ENST00000458856 62 ntBASIC1.72□□□□□ -2.13
ATF4P18848 RNU7-90P-201ENST00000459216 62 ntBASIC1.72□□□□□ -2.13
ATF4P18848 snoU13.26-201ENST00000459452 105 ntBASIC1.72□□□□□ -2.13
ATF4P18848 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.72□□□□□ -2.13
ATF4P18848 RNU7-6P-201ENST00000516845 62 ntBASIC1.72□□□□□ -2.13
ATF4P18848 MIR548AE2-201ENST00000583456 67 ntBASIC1.72□□□□□ -2.13
ATF4P18848 Y_RNA.273-201ENST00000364703 102 ntBASIC1.71□□□□□ -2.14
ATF4P18848 SNORA2B-201ENST00000384583 137 ntBASIC1.71□□□□□ -2.14
ATF4P18848 SNORA75.2-201ENST00000391138 150 ntBASIC1.71□□□□□ -2.14
ATF4P18848 SNORA75.3-201ENST00000391231 150 ntBASIC1.71□□□□□ -2.14
ATF4P18848 RNU6-1064P-201ENST00000410626 104 ntBASIC1.71□□□□□ -2.14
ATF4P18848 Y_RNA.629-201ENST00000411368 105 ntBASIC1.71□□□□□ -2.14
ATF4P18848 Z98742.3-201ENST00000418637 326 ntBASIC1.71□□□□□ -2.14
ATF4P18848 MIR3124-201ENST00000582636 67 ntBASIC1.71□□□□□ -2.14
ATF4P18848 MIR5002-201ENST00000584713 97 ntBASIC1.71□□□□□ -2.14
ATF4P18848 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.71□□□□□ -2.14
ATF4P18848 AC046143.2-201ENST00000609789 160 ntBASIC1.71□□□□□ -2.14
ATF4P18848 Y_RNA.168-201ENST00000363740 102 ntBASIC1.7□□□□□ -2.14
ATF4P18848 RNU6-654P-201ENST00000364373 107 ntBASIC1.7□□□□□ -2.14
ATF4P18848 SNORD12-201ENST00000391002 90 ntBASIC1.7□□□□□ -2.14
ATF4P18848 RNU7-21P-201ENST00000459430 62 ntBASIC1.7□□□□□ -2.14
ATF4P18848 RNU6-237P-201ENST00000515985 71 ntBASIC1.7□□□□□ -2.14
ATF4P18848 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
ATF4P18848 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.7□□□□□ -2.14
ATF4P18848 RNA5SP289-201ENST00000362332 137 ntBASIC1.69□□□□□ -2.14
ATF4P18848 SNORD113.3-201ENST00000364630 78 ntBASIC1.69□□□□□ -2.14
ATF4P18848 Y_RNA.363-201ENST00000365529 113 ntBASIC1.69□□□□□ -2.14
ATF4P18848 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
ATF4P18848 RNU6-476P-201ENST00000384726 107 ntBASIC1.69□□□□□ -2.14
ATF4P18848 RNU6-1086P-201ENST00000410930 100 ntBASIC1.69□□□□□ -2.14
ATF4P18848 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ATF4P18848 RNU6-1144P-201ENST00000384247 104 ntBASIC1.68□□□□□ -2.14
ATF4P18848 SNORA25-201ENST00000384384 134 ntBASIC1.68□□□□□ -2.14
ATF4P18848 RNU6-342P-201ENST00000384521 104 ntBASIC1.68□□□□□ -2.14
ATF4P18848 MIR548A1-201ENST00000385041 97 ntBASIC1.68□□□□□ -2.14
ATF4P18848 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.68□□□□□ -2.14
ATF4P18848 SNORD111-201ENST00000408139 94 ntBASIC1.68□□□□□ -2.14
ATF4P18848 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.68□□□□□ -2.14
ATF4P18848 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.68□□□□□ -2.14
ATF4P18848 RPL39P25-201ENST00000449384 154 ntBASIC1.68□□□□□ -2.14
ATF4P18848 AL662814.1-201ENST00000617364 121 ntBASIC1.68□□□□□ -2.14
ATF4P18848 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms