Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC027279.3-201ENST00000625055 122 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 MIR518A2-201ENST00000384966 87 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-913P-201ENST00000390913 95 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-816P-201ENST00000390914 107 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 MIR1302-4-201ENST00000408701 150 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 AC069257.2-201ENST00000441819 155 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU2-11P-201ENST00000459191 187 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RPS23P4-201ENST00000487908 423 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU2-13P-201ENST00000515909 113 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 RNU6-844P-201ENST00000517175 102 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
SNHG28P0DPA3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.63□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNU6-833P-201ENST00000363486 107 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNU6-112P-201ENST00000363599 104 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNU6-573P-201ENST00000383938 106 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNA5SP501-201ENST00000410990 112 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNU7-80P-201ENST00000459562 61 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 RNU7-70P-201ENST00000516941 66 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AC026271.5-201ENST00000577873 130 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 MIR3163-201ENST00000581592 73 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AC069114.2-201ENST00000604699 304 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AL442128.1-201ENST00000615151 90 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AC012531.4-201ENST00000616509 177 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 MALAT1.1-201ENST00000618249 95 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 MIR6841-201ENST00000637129 72 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AC091304.10-201ENST00000641554 121 ntBASIC1.62□□□□□ -2.15
SNHG28P0DPA3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNHG28P0DPA3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNHG28P0DPA3 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNHG28P0DPA3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-34-201ENST00000362441 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-12-201ENST00000362583 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-29-201ENST00000362834 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-9-201ENST00000362912 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-21-201ENST00000362963 81 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-14-201ENST00000363090 81 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-13-201ENST00000363358 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-41-201ENST00000363608 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-11-201ENST00000363616 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-5-201ENST00000363633 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-39-201ENST00000363694 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-4-201ENST00000363810 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-16-201ENST00000363887 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-6-201ENST00000363942 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-42-201ENST00000364273 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-15-201ENST00000364809 81 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-1-201ENST00000364961 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-26-201ENST00000365067 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-10-201ENST00000365073 81 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-43-201ENST00000365503 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-36-201ENST00000365629 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD38C-201ENST00000384381 69 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 MIR577-201ENST00000385196 96 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RNU6-679P-201ENST00000391003 106 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 HMGN2P39-201ENST00000398005 273 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RPL39P25-201ENST00000449384 154 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RPS29P29-201ENST00000456396 171 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 RNU6-795P-201ENST00000516323 103 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 MIR4778-201ENST00000577635 80 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SNORD115-40-201ENST00000606510 82 ntBASIC1.61□□□□□ -2.15
SNHG28P0DPA3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SNHG28P0DPA3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNHG28P0DPA3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNHG28P0DPA3 MIR302B-201ENST00000362188 73 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 SNORA7.1-201ENST00000363750 139 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RNA5SP173-201ENST00000364857 136 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RNU6-616P-201ENST00000384353 107 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 SNORA48.1-201ENST00000390879 135 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 SNORA26.2-201ENST00000390922 122 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 MIR1267-201ENST00000408723 78 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 HMGN1P33-201ENST00000432945 451 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RPL23AP6-201ENST00000446637 472 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RNU7-96P-201ENST00000459535 64 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RNA5SP137-201ENST00000516833 135 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.6□□□□□ -2.15
SNHG28P0DPA3 RNY3P2-201ENST00000362918 102 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 SNORD115-19-201ENST00000363098 82 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 SNORD115-18-201ENST00000363293 82 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 SNORD115-17-201ENST00000364612 82 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 334.7 ms