Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC098479.1-201ENST00000609225 154 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 SNORD56B-201ENST00000384713 71 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 AC144568.1-201ENST00000520139 137 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 MIR3145-201ENST00000580727 82 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 AC091932.4-201ENST00000623386 200 ntBASIC-1.32□□□□□ -2.62
CXCL1P09341 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 AL445193.1-201ENST00000441183 141 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 RNU6-893P-201ENST00000458841 100 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 RNU7-4P-201ENST00000516961 62 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 RNU7-35P-201ENST00000517174 62 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 AC021613.1-201ENST00000623880 111 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 MIR1321-201ENST00000637766 79 ntBASIC-1.33□□□□□ -2.62
CXCL1P09341 RNY1P2-201ENST00000364820 117 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 RNU6-429P-201ENST00000384582 108 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 RNU6-901P-201ENST00000384593 106 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 RNU6-383P-201ENST00000410864 94 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.34□□□□□ -2.62
CXCL1P09341 RNU6-911P-201ENST00000516523 104 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.34□□□□□ -2.62
CXCL1P09341 MTND5P40-201ENST00000559945 246 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 U6.92-201ENST00000636464 89 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 AC024614.3-201ENST00000637860 256 ntBASIC-1.34□□□□□ -2.62
CXCL1P09341 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 RNU6-780P-201ENST00000391030 104 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 RPS29P25-201ENST00000481709 171 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 MTCO2P24-201ENST00000515611 426 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 RNU7-13P-201ENST00000516413 62 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
CXCL1P09341 AC093424.1-201ENST00000604999 338 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 MIR6738-201ENST00000619620 64 ntBASIC-1.35□□□□□ -2.63
CXCL1P09341 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.36□□□□□ -2.63
CXCL1P09341 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.36□□□□□ -2.63
CXCL1P09341 RNU4-70P-201ENST00000384579 139 ntBASIC-1.36□□□□□ -2.63
CXCL1P09341 AC093423.1-201ENST00000440817 142 ntBASIC-1.36□□□□□ -2.63
CXCL1P09341 RNU6-397P-201ENST00000516226 104 ntBASIC-1.36□□□□□ -2.63
CXCL1P09341 RNU6-259P-201ENST00000383999 107 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 RNY3P5-201ENST00000384127 102 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 MIR548K-201ENST00000408406 116 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 MTND3P10-201ENST00000450967 341 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 TRAJ51-201ENST00000504127 63 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 YWHAEP2-201ENST00000580066 112 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.37□□□□□ -2.63
CXCL1P09341 MIR367-201ENST00000362299 68 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 RNU4-80P-201ENST00000363200 141 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 RNY4P3-201ENST00000365254 95 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 MIR519A1-201ENST00000385257 85 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 RNA5SP395-201ENST00000516567 118 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 MIR5197-201ENST00000583721 112 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 PISRT1.1-201ENST00000616930 107 ntBASIC-1.38□□□□□ -2.63
CXCL1P09341 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 RNU6-154P-201ENST00000384306 106 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 RNU7-55P-201ENST00000459426 62 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.39□□□□□ -2.63
CXCL1P09341 SNORD38.3-201ENST00000516599 73 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 RNU7-110P-201ENST00000516891 62 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 MIR4724-201ENST00000579485 89 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 MIR4324-201ENST00000584846 72 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 MIR376A2-201ENST00000636782 80 ntBASIC-1.39□□□□□ -2.63
CXCL1P09341 DEFB108C-201ENST00000400154 252 ntBASIC-1.4□□□□□ -2.63
CXCL1P09341 RPS3AP52-201ENST00000435639 297 ntBASIC-1.4□□□□□ -2.63
CXCL1P09341 MIR548AE1-201ENST00000583292 70 ntBASIC-1.4□□□□□ -2.63
CXCL1P09341 U2.1-201ENST00000618978 145 ntBASIC-1.4□□□□□ -2.63
CXCL1P09341 MIR6086-201ENST00000638065 55 ntBASIC-1.4□□□□□ -2.63
CXCL1P09341 MIR20A-201ENST00000362279 71 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 MIR587-201ENST00000384845 96 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 RNU2-55P-201ENST00000411146 174 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 AC040926.1-201ENST00000530195 238 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 AC013791.1-201ENST00000616619 62 ntBASIC-1.41□□□□□ -2.64
CXCL1P09341 MTND5P18-201ENST00000445624 1801 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-10P-201ENST00000384036 107 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 SNORD63-201ENST00000384262 68 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-24P-201ENST00000384440 107 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR617-201ENST00000385030 97 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR519E-201ENST00000385075 84 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR518B-201ENST00000385127 83 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-763P-201ENST00000390865 106 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-721P-201ENST00000410155 105 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms