Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU6-580P-201ENST00000365159 107 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CSDE1O75534 SNORD77.3-201ENST00000391113 65 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 RNA5SP222-201ENST00000411039 105 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 RNU6-327P-201ENST00000516270 127 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 RNY3P16-201ENST00000516338 101 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 MIR3129-201ENST00000581095 76 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 Z97988.1-201ENST00000637697 135 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 RNU6-103P-201ENST00000363686 107 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 SNORD27-201ENST00000363981 72 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 Y_RNA.308-201ENST00000365043 101 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 Y_RNA.440-201ENST00000384120 114 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 AL121914.1-201ENST00000450188 156 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 SNORD127-201ENST00000458892 86 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 MIR6740-201ENST00000618268 113 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CSDE1O75534 AC010332.2-201ENST00000613083 1904 ntBASIC0.6□□□□□ -2.31
CSDE1O75534 Y_RNA.351-201ENST00000365436 96 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MIR568-201ENST00000385036 95 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MTND2P23-201ENST00000422990 651 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 RNA5SP121-201ENST00000516537 101 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 MIR8055-201ENST00000610739 97 ntBASIC0.59□□□□□ -2.31
CSDE1O75534 Y_RNA.205-201ENST00000364128 113 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 Y_RNA.477-201ENST00000384352 108 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 Y_RNA.542-201ENST00000384641 111 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 Y_RNA.556-201ENST00000384677 113 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 MIR588-201ENST00000384900 83 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 RNU6-493P-201ENST00000391321 108 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 RNU6-602P-201ENST00000411155 105 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 MTCYBP9-201ENST00000431021 303 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 RNU7-45P-201ENST00000459460 63 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 SCARNA15.1-201ENST00000516384 125 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.58□□□□□ -2.32
CSDE1O75534 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
CSDE1O75534 Y_RNA.65-201ENST00000362846 100 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 RNY1P8-201ENST00000383970 114 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.57□□□□□ -2.32
CSDE1O75534 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 MIR4744-201ENST00000581563 82 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 MIR4676-201ENST00000583078 72 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
CSDE1O75534 AL596211.1-201ENST00000569873 2277 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 Y_RNA.133-201ENST00000363428 110 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 Y_RNA.162-201ENST00000363683 102 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 RNU6-1165P-201ENST00000410119 107 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
CSDE1O75534 SEPT7P4-201ENST00000437076 306 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 AL118496.2-201ENST00000448300 230 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.56□□□□□ -2.32
CSDE1O75534 RNU7-80P-201ENST00000459562 61 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 MTND1P19-201ENST00000511780 315 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 Y_RNA.797-201ENST00000515977 94 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 RNU7-70P-201ENST00000516941 66 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 MIR5197-201ENST00000583721 112 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 AC020891.4-201ENST00000605745 93 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 RNU2-4P-201ENST00000606190 192 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.56□□□□□ -2.32
CSDE1O75534 RNU6-923P-201ENST00000364753 107 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 Y_RNA.454-201ENST00000384224 113 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 Y_RNA.562-201ENST00000384695 113 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 SNORD12C-201ENST00000386307 89 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 MIR1257-201ENST00000408490 117 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 RNA5SP261-201ENST00000410536 106 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 MIR18B-201ENST00000454574 71 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
CSDE1O75534 Y_RNA.539-201ENST00000384635 107 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 RNU4-43P-201ENST00000410628 137 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 Y_RNA.618-201ENST00000410949 107 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 RPL39P25-201ENST00000449384 154 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 snoU13.2-201ENST00000459201 104 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 RNU6-1045P-201ENST00000516321 107 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 Y_RNA.680-201ENST00000516441 93 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 SNORD116-25-201ENST00000516517 92 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 MIR4804-201ENST00000581683 73 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 AC091932.4-201ENST00000623386 200 ntBASIC0.54□□□□□ -2.32
CSDE1O75534 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CSDE1O75534 RNY4P28-201ENST00000365281 93 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 RNU6-597P-201ENST00000365620 102 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 RNU6-364P-201ENST00000384387 107 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 SNORA20-201ENST00000384662 132 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 RNU6-578P-201ENST00000390980 103 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 Y_RNA.668-201ENST00000516233 93 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 AL365205.2-201ENST00000594586 68 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 MIR6717-201ENST00000622747 73 ntBASIC0.53□□□□□ -2.32
CSDE1O75534 Y_RNA.182-201ENST00000363880 111 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 Y_RNA.350-201ENST00000365409 98 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 RNU6-1292P-201ENST00000383856 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 246.4 ms