Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNY3P5-201ENST00000384127 102 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 MIR616-201ENST00000385293 97 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
TRIM3O75382 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.36□□□□□ -2.35
TRIM3O75382 MIR3129-201ENST00000581095 76 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 RN7SL793P-201ENST00000583259 296 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 AL365265.1-201ENST00000621045 234 ntBASIC0.36□□□□□ -2.35
TRIM3O75382 Y_RNA.416-201ENST00000384014 113 ntBASIC0.35□□□□□ -2.35
TRIM3O75382 MIR6717-201ENST00000622747 73 ntBASIC0.35□□□□□ -2.35
TRIM3O75382 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRIM3O75382 MIR30D-201ENST00000362283 70 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.82-201ENST00000363000 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.92-201ENST00000363043 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 SNORD114-23-201ENST00000363536 72 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.235-201ENST00000364412 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.306-201ENST00000365015 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.312-201ENST00000365089 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.322-201ENST00000365151 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 RNU4-45P-201ENST00000365469 141 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.483-201ENST00000384380 101 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 MT-TW-201ENST00000387382 68 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 SNORA26.6-201ENST00000391256 115 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.650-201ENST00000459002 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.777-201ENST00000516982 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.771-201ENST00000598668 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 AC097639.2-201ENST00000603159 172 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 Y_RNA.789-201ENST00000622480 102 ntBASIC0.34□□□□□ -2.36
TRIM3O75382 RNU6-1227P-201ENST00000383981 107 ntBASIC0.33□□□□□ -2.36
TRIM3O75382 MIR1302-6-201ENST00000408466 90 ntBASIC0.33□□□□□ -2.36
TRIM3O75382 SNORD100-201ENST00000408573 76 ntBASIC0.33□□□□□ -2.36
TRIM3O75382 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
TRIM3O75382 SNORD92-201ENST00000585078 85 ntBASIC0.33□□□□□ -2.36
TRIM3O75382 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 RNU6-597P-201ENST00000365620 102 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 Y_RNA.461-201ENST00000384263 103 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 MT-TF-201ENST00000387314 71 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 RNU6-381P-201ENST00000391259 108 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 SNORD93-201ENST00000408813 74 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 MIR8062-201ENST00000621515 85 ntBASIC0.32□□□□□ -2.36
TRIM3O75382 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRIM3O75382 MIR335-201ENST00000362173 94 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 RNA5SP517-201ENST00000364724 117 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 SEPT7P4-201ENST00000437076 306 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 SNORA25.12-201ENST00000516202 82 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 AL596211.1-201ENST00000569873 2277 ntBASIC0.31□□□□□ -2.36
TRIM3O75382 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
TRIM3O75382 RNU6-653P-201ENST00000363074 106 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 Y_RNA.176-201ENST00000363815 109 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 RNY1P4-201ENST00000384595 115 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRIM3O75382 Y_RNA.618-201ENST00000410949 107 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.3□□□□□ -2.36
TRIM3O75382 RPL39P25-201ENST00000449384 154 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 RNU7-80P-201ENST00000459562 61 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 AP003072.1-201ENST00000531740 145 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 MIR4643-201ENST00000577473 78 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 MIR4282-201ENST00000583613 67 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 MIR5197-201ENST00000583721 112 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 AC091932.4-201ENST00000623386 200 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
TRIM3O75382 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 Y_RNA.54-201ENST00000362766 105 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 SNORD114-26-201ENST00000363543 72 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNU6-728P-201ENST00000365375 104 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNU4-17P-201ENST00000365598 141 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNA5SP237-201ENST00000410414 113 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNA5SP261-201ENST00000410536 106 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 Y_RNA.720-201ENST00000517166 92 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
TRIM3O75382 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 Y_RNA.542-201ENST00000384641 111 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 RNU4-83P-201ENST00000410863 133 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.28□□□□□ -2.36
TRIM3O75382 RNA5SP480-201ENST00000516840 109 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.28□□□□□ -2.36
TRIM3O75382 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 U6.104-201ENST00000637979 90 ntBASIC0.28□□□□□ -2.36
TRIM3O75382 Y_RNA.36-201ENST00000362602 112 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.76-201ENST00000362931 109 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.262-201ENST00000364641 102 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.277-201ENST00000364754 102 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.422-201ENST00000384054 114 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.454-201ENST00000384224 113 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.574-201ENST00000384766 95 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 Y_RNA.617-201ENST00000410920 90 ntBASIC0.27□□□□□ -2.37
TRIM3O75382 SNORA40.8-201ENST00000411034 126 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms