Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-109P-201ENST00000516364 107 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU6-184P-201ENST00000516514 107 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 AP001318.4-201ENST00000616637 121 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 MIR8065-201ENST00000620577 100 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU6-363P-201ENST00000362895 105 ntBASIC1.95□□□□□ -2.1
NPHS1O60500 RNU6-342P-201ENST00000384521 104 ntBASIC1.95□□□□□ -2.1
NPHS1O60500 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
NPHS1O60500 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.95□□□□□ -2.1
NPHS1O60500 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHS1O60500 MIR3192-201ENST00000584920 77 ntBASIC1.95□□□□□ -2.1
NPHS1O60500 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NPHS1O60500 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NPHS1O60500 Y_RNA.155-201ENST00000363632 101 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 RNU6-640P-201ENST00000363693 105 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 RNU4-67P-201ENST00000364569 141 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 SNORD77B-201ENST00000391112 67 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 AC245047.7-201ENST00000440265 293 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 AC009474.2-201ENST00000451383 136 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 RNU6-904P-201ENST00000516206 101 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 Y_RNA.694-201ENST00000516677 117 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 CYP3A52P-201ENST00000563326 91 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHS1O60500 MIR6873-201ENST00000622788 63 ntBASIC1.94□□□□□ -2.1
NPHS1O60500 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
NPHS1O60500 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPHS1O60500 Y_RNA.78-201ENST00000362970 110 ntBASIC1.93□□□□□ -2.1
NPHS1O60500 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
NPHS1O60500 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
NPHS1O60500 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPHS1O60500 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NPHS1O60500 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPHS1O60500 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPHS1O60500 Y_RNA.354-201ENST00000365448 111 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 SNORA18-201ENST00000384416 132 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 MIR605-201ENST00000385078 83 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 RNY4P30-201ENST00000410216 95 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 SNORA7.5-201ENST00000410672 110 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 AL353813.1-201ENST00000440700 253 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 AC005908.1-201ENST00000468701 347 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 MIR5582-201ENST00000579697 68 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NPHS1O60500 AL590808.1-201ENST00000618696 141 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
NPHS1O60500 Y_RNA.360-201ENST00000365512 102 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 RNU6-409P-201ENST00000384114 104 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 Y_RNA.544-201ENST00000384650 113 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 RNU6-733P-201ENST00000410759 104 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 AC008413.1-201ENST00000511864 177 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 RNA5SP445-201ENST00000515889 115 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 DEFB131E-201ENST00000532329 154 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
NPHS1O60500 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
NPHS1O60500 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
NPHS1O60500 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NPHS1O60500 RNU6-1099P-201ENST00000363533 107 ntBASIC1.9□□□□□ -2.11
NPHS1O60500 MIR577-201ENST00000385196 96 ntBASIC1.9□□□□□ -2.11
NPHS1O60500 RNU6-679P-201ENST00000391003 106 ntBASIC1.9□□□□□ -2.11
NPHS1O60500 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
NPHS1O60500 RNU6-521P-201ENST00000516663 105 ntBASIC1.9□□□□□ -2.11
NPHS1O60500 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NPHS1O60500 RNA5SP48-201ENST00000363969 126 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 SNORD38B-201ENST00000384690 67 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
NPHS1O60500 snoU13.25-201ENST00000458945 104 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 SNORA40.13-201ENST00000516379 120 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 RNU7-35P-201ENST00000517174 62 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 FAM71BP1-201ENST00000604431 523 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 GHRLOS.1-201ENST00000610995 70 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 Y_RNA.818-201ENST00000618813 71 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 SNORD38B-202ENST00000625943 69 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHS1O60500 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
NPHS1O60500 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
NPHS1O60500 RNY3P2-201ENST00000362918 102 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 RNU4-36P-201ENST00000364294 144 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 RNU6-1237P-201ENST00000384777 107 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 HSPE1P24-201ENST00000450782 238 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 MIR4694-201ENST00000578534 80 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 PRELID3BP2-201ENST00000605362 201 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.88□□□□□ -2.11
NPHS1O60500 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
NPHS1O60500 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms