Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 AL596028.1-201ENST00000326971 197 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 SNORD41-201ENST00000386967 70 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 RNA5SP489-201ENST00000410986 109 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 RPS23P4-201ENST00000487908 423 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 PDCD5P2-201ENST00000507570 312 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 SNORA25.15-201ENST00000516487 89 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 MIR514B-201ENST00000516774 80 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 BX248123.2-201ENST00000606318 124 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 MIR6841-201ENST00000637129 72 ntBASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMEM88BA6NKF7 SNORD115-2-201ENST00000362842 82 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 SNORD115-20-201ENST00000365099 82 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 SNORD12C-201ENST00000386307 89 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 SNORA31.4-201ENST00000516049 129 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 RNA5SP33-201ENST00000516687 98 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 RNU7-6P-201ENST00000516845 62 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 MIR3937-201ENST00000580135 106 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 AL096840.1-201ENST00000603287 93 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 MIR8055-201ENST00000610739 97 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 Z97988.1-201ENST00000637697 135 ntBASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TMEM88BA6NKF7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.02
TMEM88BA6NKF7 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 SNORD38B-201ENST00000384690 67 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 MIR548D2-201ENST00000384955 97 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 MIR676-201ENST00000390702 67 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 RNU4-69P-201ENST00000410677 143 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 AL512326.2-201ENST00000426359 151 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 RNU7-41P-201ENST00000515917 61 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 SNORD38B-202ENST00000625943 69 ntBASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
TMEM88BA6NKF7 RNU6-755P-201ENST00000364400 103 ntBASIC2.39□□□□□ -2.03
TMEM88BA6NKF7 RPL39P34-201ENST00000477141 156 ntBASIC2.39□□□□□ -2.03
TMEM88BA6NKF7 RNU6-947P-201ENST00000516264 106 ntBASIC2.39□□□□□ -2.03
TMEM88BA6NKF7 RNA5SP480-201ENST00000516840 109 ntBASIC2.39□□□□□ -2.03
TMEM88BA6NKF7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TMEM88BA6NKF7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 Y_RNA.85-201ENST00000363014 111 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 SNORD1A-201ENST00000364968 72 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 Y_RNA.309-201ENST00000365046 111 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 MIR1276-201ENST00000408707 83 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 AC245047.7-201ENST00000440265 293 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 AC008834.1-201ENST00000511612 175 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 AC022523.2-201ENST00000561045 150 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 MIR6504-201ENST00000613520 61 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.38□□□□□ -2.03
TMEM88BA6NKF7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 RNU6-1107P-201ENST00000364817 104 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 MIR4422-201ENST00000581938 83 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 AL391516.1-201ENST00000554380 2449 ntBASIC2.37□□□□□ -2.03
TMEM88BA6NKF7 SNORA63.5-201ENST00000363548 123 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 HMGN1P33-201ENST00000432945 451 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 AC005908.1-201ENST00000468701 347 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 MIR548AO-201ENST00000579992 96 ntBASIC2.36□□□□□ -2.03
TMEM88BA6NKF7 Y_RNA.507-201ENST00000384500 99 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 SNORA67.5-201ENST00000391036 107 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 MIR1302-5-201ENST00000408164 150 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 MIR1912-201ENST00000410389 80 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 AC009474.2-201ENST00000451383 136 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 AC019176.1-201ENST00000518519 225 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 SNRPGP19-201ENST00000603826 189 ntBASIC2.35□□□□□ -2.03
TMEM88BA6NKF7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
TMEM88BA6NKF7 MIR302D-201ENST00000362275 68 ntBASIC2.34□□□□□ -2.03
TMEM88BA6NKF7 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
TMEM88BA6NKF7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.34□□□□□ -2.03
TMEM88BA6NKF7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
TMEM88BA6NKF7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 SNORA63.4-201ENST00000362763 126 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 RNU6-396P-201ENST00000365369 105 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 RNU6-42P-201ENST00000384165 107 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 AL031737.1-201ENST00000450125 223 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 AL133373.1-201ENST00000497098 94 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 MIR4303-201ENST00000581299 66 ntBASIC2.33□□□□□ -2.04
TMEM88BA6NKF7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 RNU6-153P-201ENST00000364422 104 ntBASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 RNU6-602P-201ENST00000411155 105 ntBASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 AC027119.1-201ENST00000440877 241 ntBASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 AL096861.1-201ENST00000610899 123 ntBASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMEM88BA6NKF7 SNORD115-19-201ENST00000363098 82 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 SNORD115-18-201ENST00000363293 82 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 SNORD115-17-201ENST00000364612 82 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 RNU1-78P-201ENST00000391248 165 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 RNU11-2P-201ENST00000516898 142 ntBASIC2.31□□□□□ -2.04
TMEM88BA6NKF7 MIR548AE2-201ENST00000583456 67 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms