Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MTCO2P24-201ENST00000515611 426 ntBASIC-0.87□□□□□ -2.55
TRAV3A0A0B4J244 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.87□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.87□□□□□ -2.55
TRAV3A0A0B4J244 AL356055.1-201ENST00000602528 446 ntBASIC-0.87□□□□□ -2.55
TRAV3A0A0B4J244 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 RNU6-383P-201ENST00000410864 94 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 RNA5SP484-201ENST00000458857 111 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 AC015540.1-201ENST00000615828 501 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 U2.1-201ENST00000618978 145 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 AL627230.5-201ENST00000619807 58 ntBASIC-0.88□□□□□ -2.55
TRAV3A0A0B4J244 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 RNY4P14-201ENST00000363656 96 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 SNORA18-201ENST00000384416 132 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 MTND1P34-201ENST00000438556 671 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 AC107399.1-201ENST00000451226 265 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 RNU7-80P-201ENST00000459562 61 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 RNU6-397P-201ENST00000516226 104 ntBASIC-0.89□□□□□ -2.55
TRAV3A0A0B4J244 RNU4-80P-201ENST00000363200 141 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 RNU6-449P-201ENST00000383914 107 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 AL603914.1-201ENST00000401964 204 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 DEFB131E-201ENST00000532329 154 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 AC091932.4-201ENST00000623386 200 ntBASIC-0.9□□□□□ -2.55
TRAV3A0A0B4J244 MIR342-201ENST00000362212 99 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 SNORA22.1-201ENST00000362701 134 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 RNA5SP133-201ENST00000363368 119 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-510P-201ENST00000391239 108 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 RNA5SP266-201ENST00000410273 108 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-120P-201ENST00000516077 103 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 MIR5688-201ENST00000580619 83 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 MIR4436A-201ENST00000585278 85 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 MIR376A2-201ENST00000636782 80 ntBASIC-0.91□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 MIR181A1-201ENST00000385026 110 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-763P-201ENST00000390865 106 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 SNORA3B-201ENST00000391305 131 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-191P-201ENST00000516295 94 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-110P-201ENST00000516891 62 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-264P-201ENST00000517134 104 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 MIR548H5-201ENST00000580314 60 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 AC097639.2-201ENST00000603159 172 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 AC013791.1-201ENST00000616619 62 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 AC105081.1-201ENST00000617727 106 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 AC093726.3-201ENST00000637588 150 ntBASIC-0.92□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNY3P11-201ENST00000364153 102 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-47P-201ENST00000383866 107 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU2-55P-201ENST00000411146 174 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-169P-201ENST00000459456 61 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-79P-201ENST00000516082 62 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-188P-201ENST00000517063 64 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-35P-201ENST00000517174 62 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 AC021613.1-201ENST00000623880 111 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 AL669831.3-213ENST00000636676 183 ntBASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.93□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 SNORA20-201ENST00000384662 132 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 MIR181B2-201ENST00000385004 89 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 RNU2-16P-201ENST00000410712 136 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 MTND3P8-201ENST00000412909 339 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-506P-201ENST00000516553 94 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 MIR4724-201ENST00000579485 89 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 MIR5197-201ENST00000583721 112 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-10P-201ENST00000607194 63 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 U6.109-201ENST00000636749 87 ntBASIC-0.94□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-490P-201ENST00000362985 107 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 MIR626-201ENST00000385032 94 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 MIR628-201ENST00000385229 95 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 MIR526A2-201ENST00000390198 65 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-893P-201ENST00000458841 100 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 RNU7-74P-201ENST00000459104 62 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 RNU6-764P-201ENST00000516396 105 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 RNA5SP153-201ENST00000516498 76 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 MIR3920-201ENST00000581751 86 ntBASIC-0.95□□□□□ -2.56
TRAV3A0A0B4J244 MIR4760-201ENST00000585040 80 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms