Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 BX510359.1-201ENST00000456973 237 ntBASIC2.2□□□□□ -2.06
U3KQE9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
U3KQE9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.2□□□□□ -2.06
U3KQE9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
U3KQE9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.2□□□□□ -2.06
U3KQE9 MIR8057-201ENST00000620957 69 ntBASIC2.2□□□□□ -2.06
U3KQE9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
U3KQE9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
U3KQE9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
U3KQE9 AP000648.3-201ENST00000623539 4507 ntBASIC2.19□□□□□ -2.06
U3KQE9 HSBP1P2-201ENST00000299671 229 ntBASIC2.19□□□□□ -2.06
U3KQE9 RNA5SP48-201ENST00000363969 126 ntBASIC2.19□□□□□ -2.06
U3KQE9 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
U3KQE9 RNA5SP100-201ENST00000410903 110 ntBASIC2.19□□□□□ -2.06
U3KQE9 RNA5SP59-201ENST00000410922 110 ntBASIC2.19□□□□□ -2.06
U3KQE9 RNA5SP344-201ENST00000411081 104 ntBASIC2.19□□□□□ -2.06
U3KQE9 AC105272.1-201ENST00000438604 198 ntBASIC2.19□□□□□ -2.06
U3KQE9 SPINT5P-201ENST00000448174 155 ntBASIC2.19□□□□□ -2.06
U3KQE9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.19□□□□□ -2.06
U3KQE9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.19□□□□□ -2.06
U3KQE9 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
U3KQE9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.19□□□□□ -2.06
U3KQE9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.19□□□□□ -2.06
U3KQE9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
U3KQE9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
U3KQE9 MIR422A-201ENST00000362286 90 ntBASIC2.18□□□□□ -2.06
U3KQE9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.18□□□□□ -2.06
U3KQE9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.18□□□□□ -2.06
U3KQE9 RNU6-917P-201ENST00000516294 104 ntBASIC2.18□□□□□ -2.06
U3KQE9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.18□□□□□ -2.06
U3KQE9 AC012676.2-201ENST00000619258 186 ntBASIC2.18□□□□□ -2.06
U3KQE9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.18□□□□□ -2.06
U3KQE9 MIR4251-201ENST00000635819 61 ntBASIC2.18□□□□□ -2.06
U3KQE9 AL365361.1-201ENST00000566942 3481 ntBASIC2.17□□□□□ -2.06
U3KQE9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.17□□□□□ -2.06
U3KQE9 MIR519C-201ENST00000385053 87 ntBASIC2.17□□□□□ -2.06
U3KQE9 SNORD88.1-201ENST00000408684 91 ntBASIC2.17□□□□□ -2.06
U3KQE9 AC073261.1-201ENST00000429409 121 ntBASIC2.17□□□□□ -2.06
U3KQE9 SCARNA13-201ENST00000516672 275 ntBASIC2.17□□□□□ -2.06
U3KQE9 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
U3KQE9 MIR3944-201ENST00000581277 108 ntBASIC2.17□□□□□ -2.06
U3KQE9 MIR3605-201ENST00000583214 100 ntBASIC2.17□□□□□ -2.06
U3KQE9 MIR3651-201ENST00000630427 90 ntBASIC2.17□□□□□ -2.06
U3KQE9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
U3KQE9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
U3KQE9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
U3KQE9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
U3KQE9 Y_RNA.191-201ENST00000363972 113 ntBASIC2.16□□□□□ -2.06
U3KQE9 RNY1P13-201ENST00000365030 105 ntBASIC2.16□□□□□ -2.06
U3KQE9 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
U3KQE9 Y_RNA.316-201ENST00000365118 111 ntBASIC2.16□□□□□ -2.06
U3KQE9 MIR23B-201ENST00000384832 97 ntBASIC2.16□□□□□ -2.06
U3KQE9 RNA5SP237-201ENST00000410414 113 ntBASIC2.16□□□□□ -2.06
U3KQE9 AC022018.1-201ENST00000430685 241 ntBASIC2.16□□□□□ -2.06
U3KQE9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.16□□□□□ -2.06
U3KQE9 SNORA9.3-201ENST00000516383 129 ntBASIC2.16□□□□□ -2.06
U3KQE9 MTND5P40-201ENST00000559945 246 ntBASIC2.16□□□□□ -2.06
U3KQE9 AC133485.1-201ENST00000567176 124 ntBASIC2.16□□□□□ -2.06
U3KQE9 AP000753.3-201ENST00000604083 169 ntBASIC2.16□□□□□ -2.06
U3KQE9 AC007179.3-201ENST00000604976 235 ntBASIC2.16□□□□□ -2.06
U3KQE9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.16□□□□□ -2.06
U3KQE9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
U3KQE9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
U3KQE9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
U3KQE9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.16□□□□□ -2.06
U3KQE9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
U3KQE9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
U3KQE9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
U3KQE9 MIR26A1-201ENST00000362205 77 ntBASIC2.15□□□□□ -2.07
U3KQE9 SNORD115-37-201ENST00000363768 82 ntBASIC2.15□□□□□ -2.07
U3KQE9 RNY1P2-201ENST00000364820 117 ntBASIC2.15□□□□□ -2.07
U3KQE9 RNU6-652P-201ENST00000365488 107 ntBASIC2.15□□□□□ -2.07
U3KQE9 RPL31P63-201ENST00000422565 375 ntBASIC2.15□□□□□ -2.07
U3KQE9 RPS29P11-201ENST00000496507 171 ntBASIC2.15□□□□□ -2.07
U3KQE9 AC093729.1-201ENST00000513074 128 ntBASIC2.15□□□□□ -2.07
U3KQE9 AC141846.1-201ENST00000568348 142 ntBASIC2.15□□□□□ -2.07
U3KQE9 AL513043.2-201ENST00000573941 143 ntBASIC2.15□□□□□ -2.07
U3KQE9 MIR548AO-201ENST00000579992 96 ntBASIC2.15□□□□□ -2.07
U3KQE9 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
U3KQE9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.15□□□□□ -2.07
U3KQE9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
U3KQE9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
U3KQE9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
U3KQE9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
U3KQE9 Y_RNA.168-201ENST00000363740 102 ntBASIC2.14□□□□□ -2.07
U3KQE9 RNU6-776P-201ENST00000364403 104 ntBASIC2.14□□□□□ -2.07
U3KQE9 RNU6-1022P-201ENST00000365049 104 ntBASIC2.14□□□□□ -2.07
U3KQE9 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
U3KQE9 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
U3KQE9 AL139132.1-201ENST00000431587 344 ntBASIC2.14□□□□□ -2.07
U3KQE9 RNU1-98P-201ENST00000458992 160 ntBASIC2.14□□□□□ -2.07
U3KQE9 S100A11P2-201ENST00000467589 312 ntBASIC2.14□□□□□ -2.07
U3KQE9 RNA5SP341-201ENST00000516261 117 ntBASIC2.14□□□□□ -2.07
U3KQE9 SNORA31.15-201ENST00000516771 132 ntBASIC2.14□□□□□ -2.07
U3KQE9 SNORA31.17-201ENST00000516953 127 ntBASIC2.14□□□□□ -2.07
U3KQE9 RN7SKP57-201ENST00000517248 293 ntBASIC2.14□□□□□ -2.07
U3KQE9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.14□□□□□ -2.07
U3KQE9 AL662814.1-201ENST00000617364 121 ntBASIC2.14□□□□□ -2.07
U3KQE9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
U3KQE9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms