Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORD115-6-201ENST00000363942 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-42-201ENST00000364273 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-15-201ENST00000364809 81 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-1-201ENST00000364961 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-26-201ENST00000365067 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-10-201ENST00000365073 81 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-43-201ENST00000365503 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-36-201ENST00000365629 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 AC107297.1-201ENST00000459991 176 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORA31.17-201ENST00000516953 127 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 MIR4285-201ENST00000581001 85 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 SNORD115-40-201ENST00000606510 82 ntBASIC2.03□□□□□ -2.08
CTDP1Q9Y5B0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CTDP1Q9Y5B0 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 MIR302B-201ENST00000362188 73 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-153P-201ENST00000364422 104 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 SNORA1.2-201ENST00000365189 134 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-880P-201ENST00000384526 107 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 COX6CP6-201ENST00000490840 228 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 MIR3683-201ENST00000580847 82 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 AC021443.1-201ENST00000604478 211 ntBASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CTDP1Q9Y5B0 MIR424-201ENST00000362227 98 ntBASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 AL035398.1-201ENST00000430869 322 ntBASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 RNU7-96P-201ENST00000459535 64 ntBASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 RPS29P24-201ENST00000486345 171 ntBASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.01□□□□□ -2.09
CTDP1Q9Y5B0 Y_RNA.370-201ENST00000365589 108 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 MIR570-201ENST00000384917 97 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 AC063976.4-201ENST00000421971 163 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-998P-201ENST00000515894 101 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 RNY4P20-201ENST00000516678 93 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
CTDP1Q9Y5B0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2□□□□□ -2.09
CTDP1Q9Y5B0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CTDP1Q9Y5B0 RNU4-16P-201ENST00000364737 141 ntBASIC1.99□□□□□ -2.09
CTDP1Q9Y5B0 MIR526A1-201ENST00000384897 85 ntBASIC1.99□□□□□ -2.09
CTDP1Q9Y5B0 RNU7-164P-201ENST00000459221 62 ntBASIC1.99□□□□□ -2.09
CTDP1Q9Y5B0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
CTDP1Q9Y5B0 AP000648.3-201ENST00000623539 4507 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-457P-201ENST00000363999 107 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 SNORA70.7-201ENST00000384159 133 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 MIR759-201ENST00000390224 91 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 RNU2-11P-201ENST00000459191 187 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 SUMO2P16-201ENST00000519475 264 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 AC007012.1-201ENST00000567192 175 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 MIR4305-201ENST00000583252 102 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 FAM106DP-201ENST00000586416 501 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 HSPE1P19-201ENST00000603327 295 ntBASIC1.98□□□□□ -2.09
CTDP1Q9Y5B0 MIR378A-201ENST00000362177 66 ntBASIC1.97□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-755P-201ENST00000364400 103 ntBASIC1.97□□□□□ -2.09
CTDP1Q9Y5B0 RNU7-67P-201ENST00000459003 62 ntBASIC1.97□□□□□ -2.09
CTDP1Q9Y5B0 SNORD123-201ENST00000459473 70 ntBASIC1.97□□□□□ -2.09
CTDP1Q9Y5B0 RNU6-412P-201ENST00000516434 106 ntBASIC1.97□□□□□ -2.09
CTDP1Q9Y5B0 SNORA67.5-201ENST00000391036 107 ntBASIC1.96□□□□□ -2.1
CTDP1Q9Y5B0 RNU7-123P-201ENST00000515911 60 ntBASIC1.96□□□□□ -2.1
CTDP1Q9Y5B0 SNORD53B-201ENST00000577887 78 ntBASIC1.96□□□□□ -2.1
CTDP1Q9Y5B0 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
CTDP1Q9Y5B0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-203P-201ENST00000384038 104 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 RNU7-53P-201ENST00000516705 60 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-958P-201ENST00000516995 106 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 MIR548AR-201ENST00000582191 57 ntBASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CTDP1Q9Y5B0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 RNY4P6-201ENST00000363667 96 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-414P-201ENST00000363705 104 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 SNORD28B-201ENST00000390993 75 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 RPS29P29-201ENST00000456396 171 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 AC106754.2-201ENST00000623006 233 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 AC021613.1-201ENST00000623880 111 ntBASIC1.94□□□□□ -2.1
CTDP1Q9Y5B0 Y_RNA.281-201ENST00000364774 94 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 SNORD12C-201ENST00000386307 89 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 AL022718.1-201ENST00000412004 84 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 RNU2-35P-201ENST00000516446 142 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 MIR4422-201ENST00000581938 83 ntBASIC1.93□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 RNU7-45P-201ENST00000459460 63 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 SNORA31.4-201ENST00000516049 129 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 SNORA74.3-201ENST00000517108 154 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 246.2 ms