Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 MIR563-201ENST00000385080 79 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 SNORD77.3-201ENST00000391113 65 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 MIR548I3-201ENST00000408378 149 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 RNU2-70P-201ENST00000410718 179 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-651P-201ENST00000411040 105 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 AC015818.7-201ENST00000428754 109 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 HMGN1P33-201ENST00000432945 451 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 AC087499.7-201ENST00000441958 109 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 SNRPGP8-201ENST00000454064 226 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-1189P-201ENST00000383958 107 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.422-201ENST00000384054 114 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 MIR588-201ENST00000384900 83 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 MT-TT-201ENST00000387460 66 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-1228P-201ENST00000391014 107 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-1165P-201ENST00000410119 107 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-1190P-201ENST00000410811 104 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU7-56P-201ENST00000458744 62 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 snoU13.2-201ENST00000459201 104 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-1153P-201ENST00000516760 105 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 MIR6734-201ENST00000621166 68 ntBASIC0.38□□□□□ -2.35
TRAPPC4Q9Y296 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 AC010332.2-201ENST00000613083 1904 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.512-201ENST00000384518 102 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-381P-201ENST00000391259 108 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 AL606845.1-201ENST00000404881 255 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 RNU2-11P-201ENST00000459191 187 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-453P-201ENST00000516819 85 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 MIR8062-201ENST00000621515 85 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.23-201ENST00000362496 106 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.122-201ENST00000363331 96 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 SNORA1-201ENST00000384107 130 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MT-TW-201ENST00000387382 68 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MIR938-201ENST00000401216 83 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MIR548F4-201ENST00000408515 105 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.590-201ENST00000410140 107 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.622-201ENST00000411091 108 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 AL138752.1-201ENST00000452964 351 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-635P-201ENST00000516651 102 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MIR376A2-201ENST00000636782 80 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 U6.104-201ENST00000637979 90 ntBASIC0.36□□□□□ -2.35
TRAPPC4Q9Y296 MIR30D-201ENST00000362283 70 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-653P-201ENST00000363074 106 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.483-201ENST00000384380 101 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.542-201ENST00000384641 111 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 MIR125B2-201ENST00000385128 89 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 SNORA26.6-201ENST00000391256 115 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 RNU7-185P-201ENST00000459215 60 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.720-201ENST00000517166 92 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 AL365265.1-201ENST00000621045 234 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
TRAPPC4Q9Y296 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRAPPC4Q9Y296 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1309P-201ENST00000363305 108 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-472P-201ENST00000384299 107 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.574-201ENST00000384766 95 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 SNORD12C-201ENST00000386307 89 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 MT-TF-201ENST00000387314 71 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 MIR1302-6-201ENST00000408466 90 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 RNU4-43P-201ENST00000410628 137 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 MTATP8P1-201ENST00000467115 207 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 AP003072.1-201ENST00000531740 145 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 AL442663.2-201ENST00000554385 511 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 MIR5197-201ENST00000583721 112 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 MIR6717-201ENST00000622747 73 ntBASIC0.34□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.7-201ENST00000362352 102 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.199-201ENST00000364014 102 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.326-201ENST00000365176 113 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.352-201ENST00000365439 102 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 RNU4-17P-201ENST00000365598 141 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1292P-201ENST00000383856 107 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.461-201ENST00000384263 103 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1160P-201ENST00000384546 104 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 MIR1257-201ENST00000408490 117 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms