Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU7-45P-201ENST00000459460 63 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 RNU6-1338P-201ENST00000516328 91 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 MIR8055-201ENST00000610739 97 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.802-201ENST00000614892 130 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 AC134503.1-201ENST00000633048 54 ntBASIC0.36□□□□□ -2.35
TM9SF3Q9HD45 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.61-201ENST00000362835 102 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.66-201ENST00000362862 102 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.152-201ENST00000363578 100 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.158-201ENST00000363651 101 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.242-201ENST00000364473 110 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 RNU6-1289P-201ENST00000384431 106 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 MIR588-201ENST00000384900 83 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 SNORA40.5-201ENST00000391061 128 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 RPS29P24-201ENST00000486345 171 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
TM9SF3Q9HD45 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 SNORD38B-201ENST00000384690 67 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU6-679P-201ENST00000391003 106 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNA5SP127-201ENST00000411051 133 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 AC087499.4-201ENST00000448505 178 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU7-73P-201ENST00000458743 63 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU2-11P-201ENST00000459191 187 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 SERF1AP1-201ENST00000514575 187 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU6-1153P-201ENST00000516760 105 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU6-453P-201ENST00000516819 85 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU6-365P-201ENST00000517113 106 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 SNORD38B-202ENST00000625943 69 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 MIR376A2-201ENST00000636782 80 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 Z97988.1-201ENST00000637697 135 ntBASIC0.34□□□□□ -2.36
TM9SF3Q9HD45 RNU6-888P-201ENST00000363010 101 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 SNORA1.1-201ENST00000364671 133 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 RNU6-597P-201ENST00000365620 102 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 SNORA8.3-201ENST00000384679 139 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 MIR526A2-201ENST00000390198 65 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.33□□□□□ -2.36
TM9SF3Q9HD45 RNA5SP257-201ENST00000363023 116 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.251-201ENST00000364551 99 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.275-201ENST00000364726 110 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 RNU6-740P-201ENST00000364734 105 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.304-201ENST00000365011 112 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 RNU6-484P-201ENST00000384016 107 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 SNORA1-201ENST00000384107 130 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 MIR626-201ENST00000385032 94 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 RNU6-1165P-201ENST00000410119 107 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 RNU6-1203P-201ENST00000410703 110 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 AL731563.1-201ENST00000442202 214 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 RNU7-102P-201ENST00000458948 62 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 MIR2909-201ENST00000617113 69 ntBASIC0.32□□□□□ -2.36
TM9SF3Q9HD45 UBE2WP1-201ENST00000362030 340 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.237-201ENST00000364439 102 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.276-201ENST00000364732 109 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.634-201ENST00000364811 113 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 MIR938-201ENST00000401216 83 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 MIR548I3-201ENST00000408378 149 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 RNU7-185P-201ENST00000459215 60 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 RNU7-53P-201ENST00000516705 60 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 AP001282.2-201ENST00000616149 309 ntBASIC0.31□□□□□ -2.36
TM9SF3Q9HD45 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.23-201ENST00000362496 106 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNU4-45P-201ENST00000365469 141 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 SNORD24-201ENST00000383884 75 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.440-201ENST00000384120 114 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNU6-364P-201ENST00000384387 107 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 AC113618.1-201ENST00000416747 285 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 SNRPGP8-201ENST00000454064 226 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 MTND4LP30-201ENST00000454092 297 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNU6-998P-201ENST00000515894 101 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNU6-561P-201ENST00000516222 102 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 AP001094.1-201ENST00000579805 193 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
TM9SF3Q9HD45 MIR30D-201ENST00000362283 70 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.44-201ENST00000362676 108 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 MIR125B2-201ENST00000385128 89 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 AL606845.1-201ENST00000404881 255 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 MIR1257-201ENST00000408490 117 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 RNU6-1299P-201ENST00000516316 100 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 RNU6-504P-201ENST00000516568 104 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 AL356055.1-201ENST00000602528 446 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 SNORA25.18-201ENST00000607153 114 ntBASIC0.29□□□□□ -2.36
TM9SF3Q9HD45 RNU6-1189P-201ENST00000383958 107 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 Y_RNA.432-201ENST00000384087 111 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 SNORD77.3-201ENST00000391113 65 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 RNU6-985P-201ENST00000410182 104 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms