Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FCF1P4-201ENST00000448326 183 ntBASIC-1.27□□□□□ -2.61
LRTM1Q9HBL6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.27□□□□□ -2.61
LRTM1Q9HBL6 AC024933.1-201ENST00000608472 348 ntBASIC-1.27□□□□□ -2.61
LRTM1Q9HBL6 AC122108.2-201ENST00000611946 526 ntBASIC-1.27□□□□□ -2.61
LRTM1Q9HBL6 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 SNORD5.1-201ENST00000458800 75 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 RNU7-149P-201ENST00000516739 59 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 MIR4280-201ENST00000582178 76 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 RNU6-86P-201ENST00000606534 107 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 AC022140.2-201ENST00000623500 188 ntBASIC-1.28□□□□□ -2.61
LRTM1Q9HBL6 RNU6-20P-201ENST00000384106 107 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 SNORD115-47-201ENST00000391226 86 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 AF228730.4-201ENST00000421457 183 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 RNU6-274P-201ENST00000459566 107 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 RNU6-531P-201ENST00000516694 104 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 SNORD36C-201ENST00000516733 66 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 RNU6-175P-201ENST00000516896 107 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 AC009094.1-201ENST00000564443 426 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 AC091931.1-201ENST00000623488 728 ntBASIC-1.29□□□□□ -2.62
LRTM1Q9HBL6 MIR302B-201ENST00000362188 73 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 SNORD114-25-201ENST00000363742 72 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 RNU4-36P-201ENST00000364294 144 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 MIR626-201ENST00000385032 94 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 SNORD38.3-201ENST00000516599 73 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 RNU2-31P-201ENST00000516954 155 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 MIR4473-201ENST00000583731 91 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 AC022441.3-201ENST00000605737 136 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 AC087752.4-201ENST00000605911 462 ntBASIC-1.3□□□□□ -2.62
LRTM1Q9HBL6 RNU6-626P-201ENST00000363354 107 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 AL365203.2-201ENST00000423444 196 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 RNU7-45P-201ENST00000459460 63 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 AC091951.2-201ENST00000500762 203 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 DISC2.1-201ENST00000612827 205 ntBASIC-1.31□□□□□ -2.62
LRTM1Q9HBL6 MIR181B2-201ENST00000385004 89 ntBASIC-1.32□□□□□ -2.62
LRTM1Q9HBL6 SNORA13-201ENST00000458790 133 ntBASIC-1.32□□□□□ -2.62
LRTM1Q9HBL6 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.32□□□□□ -2.62
LRTM1Q9HBL6 MIR4306-201ENST00000583390 91 ntBASIC-1.32□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.33□□□□□ -2.62
LRTM1Q9HBL6 RNU6-584P-201ENST00000410350 95 ntBASIC-1.33□□□□□ -2.62
LRTM1Q9HBL6 MTND1P2-201ENST00000430604 821 ntBASIC-1.33□□□□□ -2.62
LRTM1Q9HBL6 RNU6-693P-201ENST00000516134 107 ntBASIC-1.33□□□□□ -2.62
LRTM1Q9HBL6 MIR342-201ENST00000362212 99 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 SNORD114-29-201ENST00000364819 70 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 MIR539-201ENST00000365690 78 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 RNU6-721P-201ENST00000410155 105 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 AC074085.1-201ENST00000413598 418 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 MTND4P28-201ENST00000426217 387 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 SEPT14P3-201ENST00000439401 183 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 AL732372.2-207ENST00000445840 183 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 SEPT14P2-201ENST00000453405 183 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 AL500527.2-201ENST00000454105 95 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 SEPT14P4-201ENST00000513445 186 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 RN7SKP295-201ENST00000517264 153 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 FO082796.1-201ENST00000523795 183 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 AC005357.1-201ENST00000588399 301 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 MIR6851-201ENST00000617060 67 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 uc_338.10-201ENST00000621872 182 ntBASIC-1.34□□□□□ -2.62
LRTM1Q9HBL6 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNY4P7-201ENST00000364600 96 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 SNORD24-201ENST00000383884 75 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNU7-74P-201ENST00000459104 62 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNU7-141P-201ENST00000459304 62 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNU6-732P-201ENST00000516033 103 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 MIR4662B-201ENST00000579498 81 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 MIR6128-201ENST00000615528 109 ntBASIC-1.35□□□□□ -2.63
LRTM1Q9HBL6 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 RNY1P13-201ENST00000365030 105 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 RNU6-901P-201ENST00000384593 106 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 RN7SKP298-201ENST00000515950 94 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 MIR548H5-201ENST00000580314 60 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 MIR4499-201ENST00000584834 69 ntBASIC-1.36□□□□□ -2.63
LRTM1Q9HBL6 RNA5SP133-201ENST00000363368 119 ntBASIC-1.37□□□□□ -2.63
LRTM1Q9HBL6 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms