Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR5688-201ENST00000580619 83 ntBASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.37□□□□□ -2.35
RPAP3Q9H6T3 UBE2WP1-201ENST00000362030 340 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 RNU6-888P-201ENST00000363010 101 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 RNU6-364P-201ENST00000384387 107 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 MT-TT-201ENST00000387460 66 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 AL731563.1-201ENST00000442202 214 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 RNU2-11P-201ENST00000459191 187 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 AP003733.2-201ENST00000529409 171 ntBASIC0.36□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.158-201ENST00000363651 101 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 SNORA1.1-201ENST00000364671 133 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 RNU6-211P-201ENST00000384047 107 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.460-201ENST00000384255 102 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 RNU7-102P-201ENST00000458948 62 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 RNU7-185P-201ENST00000459215 60 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 RNU7-45P-201ENST00000459460 63 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 AC113195.1-201ENST00000579952 141 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 AC134503.1-201ENST00000633048 54 ntBASIC0.35□□□□□ -2.35
RPAP3Q9H6T3 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 SNORA8.3-201ENST00000384679 139 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 snoU13.2-201ENST00000459201 104 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1143P-201ENST00000516125 104 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 RNU6-504P-201ENST00000516568 104 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.711-201ENST00000516993 102 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 RNU6-570P-201ENST00000517051 105 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 RNU7-156P-201ENST00000517214 74 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 MIR2909-201ENST00000617113 69 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
RPAP3Q9H6T3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 MIR626-201ENST00000385032 94 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 SNORD100-201ENST00000408573 76 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 MTND4LP11-201ENST00000422184 280 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 RNU7-96P-201ENST00000459535 64 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 SERF1AP1-201ENST00000514575 187 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 SNORA25.12-201ENST00000516202 82 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1137P-201ENST00000517073 99 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 AC090897.1-201ENST00000580909 226 ntBASIC0.33□□□□□ -2.36
RPAP3Q9H6T3 RNA5SP517-201ENST00000364724 117 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-747P-201ENST00000390928 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 SNORD77.3-201ENST00000391113 65 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-241P-201ENST00000391148 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 MIR548P-201ENST00000408336 84 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 MIR548I3-201ENST00000408378 149 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 MIR1257-201ENST00000408490 117 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-447P-201ENST00000410293 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-355P-201ENST00000410427 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-791P-201ENST00000410467 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-705P-201ENST00000410601 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-860P-201ENST00000410860 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-785P-201ENST00000411324 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-998P-201ENST00000515894 101 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 MIR4680-201ENST00000580906 66 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 U6.90-201ENST00000614007 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 U6.70-201ENST00000620287 104 ntBASIC0.32□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.153-201ENST00000363615 91 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 MIR563-201ENST00000385080 79 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 SNORA26-201ENST00000391286 122 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 SNRPGP8-201ENST00000454064 226 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 RNU6-453P-201ENST00000516819 85 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 MIR3171-201ENST00000584270 74 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
RPAP3Q9H6T3 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 RNU6-597P-201ENST00000365620 102 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 RNU6-484P-201ENST00000384016 107 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 SNORA1-201ENST00000384107 130 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 RNU2-55P-201ENST00000411146 174 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms