Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-762P-201ENST00000517107 102 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 MIR548AE2-201ENST00000583456 67 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.342-201ENST00000365352 113 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 RNY1P7-201ENST00000384743 110 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 MIR577-201ENST00000385196 96 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 SNORD28B-201ENST00000390993 75 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 RPL23AP6-201ENST00000446637 472 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 snoU13.16-201ENST00000459350 104 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-1258P-201ENST00000516911 111 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
TRIM56Q9BRZ2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 Y_RNA.96-201ENST00000363092 109 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 Y_RNA.470-201ENST00000384307 117 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 AC096949.1-201ENST00000412047 152 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 MIR5194-201ENST00000582634 120 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 FAM106DP-201ENST00000586416 501 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 AL590808.1-201ENST00000618696 141 ntBASIC2.45□□□□□ -2.02
TRIM56Q9BRZ2 SNORD45B-201ENST00000364617 72 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 SNORA18-201ENST00000384416 132 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-913P-201ENST00000390913 95 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 SNORA7.5-201ENST00000410672 110 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-1018P-201ENST00000516577 106 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 SNORA74.3-201ENST00000517108 154 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 FO624990.1-201ENST00000636373 85 ntBASIC2.44□□□□□ -2.02
TRIM56Q9BRZ2 RNA5SP393-201ENST00000363423 117 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 SNORA1.1-201ENST00000364671 133 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 Y_RNA.377-201ENST00000365644 108 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-616P-201ENST00000384353 107 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 MIR605-201ENST00000385078 83 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-1190P-201ENST00000410811 104 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 AC004941.2-201ENST00000427009 228 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 RNU7-43P-201ENST00000516554 64 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
TRIM56Q9BRZ2 Y_RNA.354-201ENST00000365448 111 ntBASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 SNORA70B-201ENST00000384210 135 ntBASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 RNA5SP57-201ENST00000459463 123 ntBASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-170P-201ENST00000362832 104 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 SNORD114-30-201ENST00000364448 72 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-1134P-201ENST00000365156 101 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 Y_RNA.388-201ENST00000383919 113 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 MIR194-1-201ENST00000384892 85 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 MIR450A2-201ENST00000385022 100 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-679P-201ENST00000391003 106 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 AL023284.1-201ENST00000403956 276 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RNU1-41P-201ENST00000516161 162 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RNU1-48P-201ENST00000516400 162 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 AC026421.1-201ENST00000519101 163 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM56Q9BRZ2 RNU6-457P-201ENST00000363999 107 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-820P-201ENST00000384273 107 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 AC026436.1-201ENST00000510537 270 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-521P-201ENST00000516663 105 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 AC096720.1-201ENST00000604441 183 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 AC067747.1-201ENST00000608026 250 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 AC131280.1-202ENST00000624067 4211 ntBASIC2.4□□□□□ -2.03
TRIM56Q9BRZ2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 SNORA32-201ENST00000384072 121 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-1201P-201ENST00000384227 107 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AC004965.1-201ENST00000413033 213 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 MRPL35P3-201ENST00000421557 364 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AL353813.1-201ENST00000440700 253 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 JTBP1-201ENST00000441314 247 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 RNU7-61P-201ENST00000515897 61 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 RN7SKP12-201ENST00000516275 143 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AC062037.1-201ENST00000605302 128 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AC008133.2-201ENST00000624540 351 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AL512310.12-203ENST00000640543 90 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM56Q9BRZ2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-1313P-201ENST00000362622 102 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 AC244636.1-201ENST00000421152 228 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 MIR1270-201ENST00000459320 83 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 Y_RNA.659-201ENST00000515994 113 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-322P-201ENST00000516010 103 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-795P-201ENST00000516323 103 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 AC022254.1-201ENST00000567857 235 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms