Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 snoU2_19.4-201ENST00000364329 80 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 SNORA63C-201ENST00000364578 129 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 Y_RNA.422-201ENST00000384054 114 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 RNY3P5-201ENST00000384127 102 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 RNU6-472P-201ENST00000384299 107 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 Y_RNA.512-201ENST00000384518 102 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 RNU6-913P-201ENST00000390913 95 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 TRBVB-201ENST00000477100 408 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 RNU6-126P-201ENST00000516685 103 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 RNU6-570P-201ENST00000517051 105 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.45□□□□□ -2.34
FOXC2Q99958 AC011921.3-201ENST00000605540 361 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 U2.14-201ENST00000615943 113 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 MIR8062-201ENST00000621515 85 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 Z97988.1-201ENST00000637697 135 ntBASIC0.45□□□□□ -2.34
FOXC2Q99958 Y_RNA.634-201ENST00000364811 113 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 Y_RNA.412-201ENST00000384001 104 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 RNU6-1160P-201ENST00000384546 104 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 SNORA2B-201ENST00000384583 137 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AF228730.3-201ENST00000436691 102 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 snoU13.21-201ENST00000459368 105 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AC107297.1-201ENST00000459991 176 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 RNU6-693P-201ENST00000516134 107 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 RNA5SP153-201ENST00000516498 76 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 RNA5SP285-201ENST00000516619 119 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 SNORD36C-201ENST00000516733 66 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AP003484.1-201ENST00000530974 250 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AP003072.1-201ENST00000531740 145 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 MIR4643-201ENST00000577473 78 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 MIR4264-201ENST00000583520 66 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AC012433.1-201ENST00000588916 398 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 AC006006.1-201ENST00000603082 144 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.44□□□□□ -2.34
FOXC2Q99958 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
FOXC2Q99958 RNU6-653P-201ENST00000363074 106 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 Y_RNA.241-201ENST00000364470 117 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 Y_RNA.304-201ENST00000365011 112 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
FOXC2Q99958 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 Y_RNA.483-201ENST00000384380 101 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 MIR616-201ENST00000385293 97 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 MT-TT-201ENST00000387460 66 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 AC067940.1-201ENST00000458411 300 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 RNU6-504P-201ENST00000516568 104 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 RNU6-453P-201ENST00000516819 85 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 RNU6-365P-201ENST00000517113 106 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 Y_RNA.720-201ENST00000517166 92 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 AC134878.1-201ENST00000619901 243 ntBASIC0.43□□□□□ -2.34
FOXC2Q99958 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
FOXC2Q99958 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.42□□□□□ -2.34
FOXC2Q99958 Y_RNA.91-201ENST00000363042 107 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 Y_RNA.294-201ENST00000364916 102 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 SNORA27-201ENST00000384323 126 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 SNORD105-201ENST00000386910 85 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 MTATP8P1-201ENST00000467115 207 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 RPS29P24-201ENST00000486345 171 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 RNU6-958P-201ENST00000516995 106 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 AP000753.3-201ENST00000604083 169 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 uc_338.6-201ENST00000613544 171 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 AL365265.1-201ENST00000621045 234 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 MIR6086-201ENST00000638065 55 ntBASIC0.42□□□□□ -2.34
FOXC2Q99958 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
FOXC2Q99958 MIR1-1-201ENST00000362147 71 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Y_RNA.274-201ENST00000364714 101 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Y_RNA.440-201ENST00000384120 114 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Y_RNA.574-201ENST00000384766 95 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 MIR563-201ENST00000385080 79 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-205P-201ENST00000390858 107 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-1228P-201ENST00000391014 107 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 SNORD77.3-201ENST00000391113 65 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-381P-201ENST00000391259 108 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU7-67P-201ENST00000459003 62 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-1299P-201ENST00000516316 100 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 RNU6-635P-201ENST00000516651 102 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 AL117187.1-201ENST00000555482 181 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.41□□□□□ -2.34
FOXC2Q99958 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 MIR376A2-201ENST00000636782 80 ntBASIC0.41□□□□□ -2.34
FOXC2Q99958 Y_RNA.23-201ENST00000362496 106 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-934P-201ENST00000365154 107 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-738P-201ENST00000384531 106 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 SNORA26.6-201ENST00000391256 115 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 SNORA26-201ENST00000391286 122 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 SNORD58.1-201ENST00000391313 66 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 AL606845.1-201ENST00000404881 255 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-994P-201ENST00000410507 111 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU2-70P-201ENST00000410718 179 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-602P-201ENST00000411155 105 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms