Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
CHAMP1Q96JM3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.16□□□□□ -2.06
CHAMP1Q96JM3 MIR548AR-201ENST00000582191 57 ntBASIC2.16□□□□□ -2.06
CHAMP1Q96JM3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
CHAMP1Q96JM3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 SNORD28B-201ENST00000390993 75 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 RNU7-96P-201ENST00000459535 64 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 RPS29P24-201ENST00000486345 171 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 AL391516.1-201ENST00000554380 2449 ntBASIC2.15□□□□□ -2.07
CHAMP1Q96JM3 AL596211.1-201ENST00000569873 2277 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 SNORD114-26-201ENST00000363543 72 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 RNU6-690P-201ENST00000365242 106 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 SNORA6-201ENST00000384033 151 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 SNORA24-201ENST00000384096 131 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.540-201ENST00000384638 111 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 MIR548A3-201ENST00000385297 97 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 AC063976.4-201ENST00000421971 163 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 SNORD123-201ENST00000459473 70 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 COX6CP6-201ENST00000490840 228 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 RNU7-70P-201ENST00000516941 66 ntBASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.35-201ENST00000362601 101 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.649-201ENST00000459077 103 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 RNU6-917P-201ENST00000516294 104 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 RNY4P20-201ENST00000516678 93 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 MIR6504-201ENST00000613520 61 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CHAMP1Q96JM3 MIR342-201ENST00000362212 99 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 RNA5SP363-201ENST00000365072 115 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 SNORA1.2-201ENST00000365189 134 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 SNORD116-21-201ENST00000384507 92 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 MIR548A1-201ENST00000385041 97 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 MT-TI-201ENST00000387365 69 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 SNX2P2-201ENST00000424553 323 ntBASIC2.12□□□□□ -2.07
CHAMP1Q96JM3 RNU6-755P-201ENST00000364400 103 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 RNU6-439P-201ENST00000384188 106 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 AL445685.2-201ENST00000422551 342 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 RNU2-11P-201ENST00000459191 187 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 RNA5SP57-201ENST00000459463 123 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 RNU2-35P-201ENST00000516446 142 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 SUMO2P16-201ENST00000519475 264 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 FAM106DP-201ENST00000586416 501 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 AC021443.1-201ENST00000604478 211 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 AL121890.5-201ENST00000620848 304 ntBASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.11□□□□□ -2.07
CHAMP1Q96JM3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 RNU6-153P-201ENST00000364422 104 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 MIR653-201ENST00000385279 96 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 AP1B1P2-201ENST00000416196 106 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 AL035398.1-201ENST00000430869 322 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 PDCD5P2-201ENST00000507570 312 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 RNU7-123P-201ENST00000515911 60 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 MIR3683-201ENST00000580847 82 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 MIR4305-201ENST00000583252 102 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
CHAMP1Q96JM3 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 SNORA63.4-201ENST00000362763 126 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 MIR570-201ENST00000384917 97 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 JTBP1-201ENST00000441314 247 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 SNORA25.15-201ENST00000516487 89 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 SNORA77B-201ENST00000578179 125 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 AC106754.2-201ENST00000623006 233 ntBASIC2.09□□□□□ -2.07
CHAMP1Q96JM3 Y_RNA.36-201ENST00000362602 112 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 RNU4-16P-201ENST00000364737 141 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 RNA5SP190-201ENST00000365222 118 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 SNORA26.6-201ENST00000391256 115 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 RNU2-40P-201ENST00000410833 196 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 RPS29P29-201ENST00000456396 171 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 RNU7-164P-201ENST00000459221 62 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 AC107297.1-201ENST00000459991 176 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 AC021613.1-201ENST00000623880 111 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
CHAMP1Q96JM3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHAMP1Q96JM3 RNU4-62P-201ENST00000410125 130 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms