Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU7-96P-201ENST00000459535 64 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 AC092634.7-201ENST00000621022 103 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 RNU6-602P-201ENST00000411155 105 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 AF228730.3-201ENST00000436691 102 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 RNU6-1299P-201ENST00000516316 100 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 RNU6-1137P-201ENST00000517073 99 ntBASIC0.35□□□□□ -2.35
VMP1Q96GC9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
VMP1Q96GC9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 Y_RNA.117-201ENST00000363294 101 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 Y_RNA.202-201ENST00000364083 110 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 Y_RNA.410-201ENST00000383992 113 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 RNU6-484P-201ENST00000384016 107 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 SNORD77.3-201ENST00000391113 65 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 MIR548I3-201ENST00000408378 149 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 RNU2-70P-201ENST00000410718 179 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 AL138752.1-201ENST00000452964 351 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 RNU2-11P-201ENST00000459191 187 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 snoU13.2-201ENST00000459201 104 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 RNU6-998P-201ENST00000515894 101 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 RN7SL793P-201ENST00000583259 296 ntBASIC0.34□□□□□ -2.36
VMP1Q96GC9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 Y_RNA.393-201ENST00000383936 102 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNY3P5-201ENST00000384127 102 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNU6-679P-201ENST00000391003 106 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNU6-985P-201ENST00000410182 104 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNA5SP153-201ENST00000516498 76 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 RNU6-570P-201ENST00000517051 105 ntBASIC0.33□□□□□ -2.36
VMP1Q96GC9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 MIR563-201ENST00000385080 79 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 MIR125B2-201ENST00000385128 89 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 MIR1257-201ENST00000408490 117 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.32□□□□□ -2.36
VMP1Q96GC9 RNU7-185P-201ENST00000459215 60 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 AL356055.1-201ENST00000602528 446 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 AC097639.2-201ENST00000603159 172 ntBASIC0.32□□□□□ -2.36
VMP1Q96GC9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 SNORA33.2-201ENST00000365413 134 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
VMP1Q96GC9 RNU6-364P-201ENST00000384387 107 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 MT-TT-201ENST00000387460 66 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 SNRPGP8-201ENST00000454064 226 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 SNORD2.1-201ENST00000458762 69 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 RNU7-102P-201ENST00000458948 62 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.31□□□□□ -2.36
VMP1Q96GC9 SNORA25.12-201ENST00000516202 82 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 AC090897.1-201ENST00000580909 226 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 AC008608.1-201ENST00000603910 127 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 AP001282.2-201ENST00000616149 309 ntBASIC0.31□□□□□ -2.36
VMP1Q96GC9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-740P-201ENST00000364734 105 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 MIR616-201ENST00000385293 97 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 MT-TF-201ENST00000387314 71 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1319P-201ENST00000390855 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-747P-201ENST00000390928 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-241P-201ENST00000391148 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-447P-201ENST00000410293 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-355P-201ENST00000410427 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-791P-201ENST00000410467 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-705P-201ENST00000410601 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-860P-201ENST00000410860 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 RNU6-785P-201ENST00000411324 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 TRBVB-201ENST00000477100 408 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.3□□□□□ -2.36
VMP1Q96GC9 SNORD92-201ENST00000585078 85 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.771-201ENST00000598668 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 U6.90-201ENST00000614007 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 U6.70-201ENST00000620287 104 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 Y_RNA.789-201ENST00000622480 102 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.3□□□□□ -2.36
VMP1Q96GC9 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
VMP1Q96GC9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VMP1Q96GC9 MIR342-201ENST00000362212 99 ntBASIC0.29□□□□□ -2.36
VMP1Q96GC9 MIR30D-201ENST00000362283 70 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms