Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 Y_RNA.680-201ENST00000516441 93 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 MIR4264-201ENST00000583520 66 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 AL162730.1-201ENST00000605734 292 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 RNU2-4P-201ENST00000606190 192 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 MIR8055-201ENST00000610739 97 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 Y_RNA.60-201ENST00000362831 98 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 SNORD114-22-201ENST00000365423 72 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 Y_RNA.447-201ENST00000384184 113 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RNU6-913P-201ENST00000390913 95 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 SNORD77.3-201ENST00000391113 65 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RNU6-998P-201ENST00000515894 101 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 Y_RNA.797-201ENST00000515977 94 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 AC108706.1-201ENST00000611053 297 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
LDB1Q86U70 Y_RNA.144-201ENST00000363521 113 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 Y_RNA.224-201ENST00000364308 111 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 RNU6-923P-201ENST00000364753 107 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 Y_RNA.307-201ENST00000365022 117 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 SNORD38B-201ENST00000384690 67 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 AC090844.1-201ENST00000422019 156 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.85□□□□□ -2.27
LDB1Q86U70 RNU2-11P-201ENST00000459191 187 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LDB1Q86U70 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
LDB1Q86U70 MIR3129-201ENST00000581095 76 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 MIR4452-201ENST00000583004 71 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 SNORD38B-202ENST00000625943 69 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 Z97988.1-201ENST00000637697 135 ntBASIC0.85□□□□□ -2.27
LDB1Q86U70 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 RNU6-1292P-201ENST00000383856 107 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 RNU6-205P-201ENST00000390858 107 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 Y_RNA.618-201ENST00000410949 107 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 AL138752.1-201ENST00000452964 351 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 SNORD116-25-201ENST00000516517 92 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 RNU6-111P-201ENST00000517179 105 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 AC004817.2-201ENST00000561794 651 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 AL365205.2-201ENST00000594586 68 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
LDB1Q86U70 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
LDB1Q86U70 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
LDB1Q86U70 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR1-1-201ENST00000362147 71 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 SNORA1.1-201ENST00000364671 133 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 Y_RNA.571-201ENST00000384753 98 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR548I3-201ENST00000408378 149 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 AC244023.1-201ENST00000426884 112 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR4308-201ENST00000580634 81 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR378D2-201ENST00000580636 98 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR5197-201ENST00000583721 112 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 AC242498.1-201ENST00000604134 111 ntBASIC0.83□□□□□ -2.28
LDB1Q86U70 MIR342-201ENST00000362212 99 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 Y_RNA.182-201ENST00000363880 111 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 Y_RNA.351-201ENST00000365436 96 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 RNU4-70P-201ENST00000384579 139 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
LDB1Q86U70 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LDB1Q86U70 MIR302B-201ENST00000362188 73 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 Y_RNA.454-201ENST00000384224 113 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 HMGN1P33-201ENST00000432945 451 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
LDB1Q86U70 RNU7-62P-201ENST00000458856 62 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.81□□□□□ -2.28
LDB1Q86U70 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 MIR376A2-201ENST00000636782 80 ntBASIC0.81□□□□□ -2.28
LDB1Q86U70 RNU6-978P-201ENST00000364371 103 ntBASIC0.8□□□□□ -2.28
LDB1Q86U70 RNU6-275P-201ENST00000364910 107 ntBASIC0.8□□□□□ -2.28
LDB1Q86U70 RNU6-643P-201ENST00000384018 107 ntBASIC0.8□□□□□ -2.28
LDB1Q86U70 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
LDB1Q86U70 RNU6-602P-201ENST00000411155 105 ntBASIC0.8□□□□□ -2.28
LDB1Q86U70 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.8□□□□□ -2.28
LDB1Q86U70 Y_RNA.200-201ENST00000364018 102 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 RNU6-934P-201ENST00000365154 107 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 RNA5SP261-201ENST00000410536 106 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
LDB1Q86U70 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.79□□□□□ -2.28
LDB1Q86U70 Y_RNA.75-201ENST00000362927 97 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms