Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 U7.3-201ENST00000616123 62 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
EPHB3P54753 Y_RNA.171-201ENST00000363760 102 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 SNORA1.2-201ENST00000365189 134 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 SNORA70.7-201ENST00000384159 133 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 RNU6-950P-201ENST00000384651 107 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 RNA5SP270-201ENST00000411361 118 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 RNU6-1018P-201ENST00000516577 106 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 RNU6-1258P-201ENST00000516911 111 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 AC022254.1-201ENST00000567857 235 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 MIR4777-201ENST00000583710 86 ntBASIC2.29□□□□□ -2.04
EPHB3P54753 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
EPHB3P54753 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
EPHB3P54753 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
EPHB3P54753 RNA5SP432-201ENST00000362480 116 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 SNORD45B-201ENST00000364617 72 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNU6-60P-201ENST00000364792 103 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 SNORA24-201ENST00000384096 131 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNU6-1201P-201ENST00000384227 107 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNU6-675P-201ENST00000384236 104 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 SNORA18-201ENST00000384416 132 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 MRPL35P3-201ENST00000421557 364 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 HMGN2P3-201ENST00000433603 273 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 HMGN2P5-201ENST00000436882 273 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 MIR1270-201ENST00000459320 83 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNU7-45P-201ENST00000459460 63 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNA5SP395-201ENST00000516567 118 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 RNA5SP168-201ENST00000516642 112 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 MIR548Z-201ENST00000584743 97 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 MIR3202-2-201ENST00000635980 79 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
EPHB3P54753 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
EPHB3P54753 AC245060.5-201ENST00000610778 3293 ntBASIC2.28□□□□□ -2.04
EPHB3P54753 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
EPHB3P54753 RNU6-228P-201ENST00000362700 106 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 SNORA22.1-201ENST00000362701 134 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 SNORD77B-201ENST00000391112 67 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 SNORA26.6-201ENST00000391256 115 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 AC022137.1-201ENST00000483735 151 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 RPL23AP63-201ENST00000498752 471 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 RNU2-13P-201ENST00000515909 113 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 RNU7-53P-201ENST00000516705 60 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 MIR3152-201ENST00000579801 74 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 MIR4524B-201ENST00000581569 115 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.27□□□□□ -2.05
EPHB3P54753 Y_RNA.95-201ENST00000363079 95 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 SNORD115-3-201ENST00000363100 82 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 RNY1P1-201ENST00000364372 112 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 Y_RNA.430-201ENST00000384081 110 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 Y_RNA.470-201ENST00000384307 117 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 RNU6-616P-201ENST00000384353 107 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 RNA5SP261-201ENST00000410536 106 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 SNORA7.5-201ENST00000410672 110 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 RNU7-193P-201ENST00000516723 65 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 MIR548AE2-201ENST00000583456 67 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.26□□□□□ -2.05
EPHB3P54753 AC091304.10-201ENST00000641554 121 ntBASIC2.26□□□□□ -2.05
EPHB3P54753 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
EPHB3P54753 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
EPHB3P54753 Y_RNA.370-201ENST00000365589 108 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 RNU6-1124P-201ENST00000384169 107 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 BTF3P4-201ENST00000418852 495 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 BX510359.4-201ENST00000423750 193 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
EPHB3P54753 RPS29P29-201ENST00000456396 171 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 RNU6-162P-201ENST00000516228 103 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 DNAJC19P9-201ENST00000555084 351 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 MIR5094-201ENST00000578766 85 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
EPHB3P54753 RNU6-1313P-201ENST00000362622 102 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 RNU7-73P-201ENST00000458743 63 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 RNA5SP33-201ENST00000516687 98 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 Y_RNA.705-201ENST00000516862 110 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 DEFB122-202ENST00000569013 197 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 IGLL4P-201ENST00000614590 133 ntBASIC2.24□□□□□ -2.05
EPHB3P54753 MIR516B2-201ENST00000385190 85 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 MIR136-201ENST00000385207 82 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 SNORD23.1-201ENST00000408212 104 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 RNU6-887P-201ENST00000410660 100 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 RPL39P39-201ENST00000455840 151 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 snoU13.23-201ENST00000458863 104 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 MIR4439-201ENST00000583746 80 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms