Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 MIR5194-201ENST00000582634 120 ntBASIC2.84□□□□□ -1.95
RFC5P40937 MIR3935-201ENST00000583472 104 ntBASIC2.84□□□□□ -1.95
RFC5P40937 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.84□□□□□ -1.95
RFC5P40937 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RFC5P40937 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RFC5P40937 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.84□□□□□ -1.96
RFC5P40937 MIR449A-201ENST00000362113 91 ntBASIC2.83□□□□□ -1.96
RFC5P40937 RNU6-1313P-201ENST00000362622 102 ntBASIC2.83□□□□□ -1.96
RFC5P40937 SNORD115-35-201ENST00000365122 82 ntBASIC2.83□□□□□ -1.96
RFC5P40937 SNORA11.2-201ENST00000408318 127 ntBASIC2.83□□□□□ -1.96
RFC5P40937 RNU6-602P-201ENST00000411155 105 ntBASIC2.83□□□□□ -1.96
RFC5P40937 Y_RNA.659-201ENST00000515994 113 ntBASIC2.83□□□□□ -1.96
RFC5P40937 RNU7-2P-201ENST00000516096 62 ntBASIC2.83□□□□□ -1.96
RFC5P40937 RNU6-795P-201ENST00000516323 103 ntBASIC2.83□□□□□ -1.96
RFC5P40937 RNU7-35P-201ENST00000517174 62 ntBASIC2.83□□□□□ -1.96
RFC5P40937 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.83□□□□□ -1.96
RFC5P40937 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RFC5P40937 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
RFC5P40937 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
RFC5P40937 SNORA67.1-201ENST00000364749 141 ntBASIC2.82□□□□□ -1.96
RFC5P40937 RNU6-342P-201ENST00000384521 104 ntBASIC2.82□□□□□ -1.96
RFC5P40937 SNORD38B-201ENST00000384690 67 ntBASIC2.82□□□□□ -1.96
RFC5P40937 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
RFC5P40937 AL161935.2-201ENST00000414627 60 ntBASIC2.82□□□□□ -1.96
RFC5P40937 AL513328.1-201ENST00000446460 224 ntBASIC2.82□□□□□ -1.96
RFC5P40937 RNA5SP320-201ENST00000516263 124 ntBASIC2.82□□□□□ -1.96
RFC5P40937 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.82□□□□□ -1.96
RFC5P40937 AC012531.4-201ENST00000616509 177 ntBASIC2.82□□□□□ -1.96
RFC5P40937 SNORD38B-202ENST00000625943 69 ntBASIC2.82□□□□□ -1.96
RFC5P40937 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.82□□□□□ -1.96
RFC5P40937 RNY4P29-201ENST00000410801 97 ntBASIC2.81□□□□□ -1.96
RFC5P40937 MRPL35P3-201ENST00000421557 364 ntBASIC2.81□□□□□ -1.96
RFC5P40937 RPL23AP94-201ENST00000512518 302 ntBASIC2.81□□□□□ -1.96
RFC5P40937 AC108729.3-201ENST00000513484 108 ntBASIC2.81□□□□□ -1.96
RFC5P40937 RNU7-61P-201ENST00000515897 61 ntBASIC2.81□□□□□ -1.96
RFC5P40937 MIR548AO-201ENST00000579992 96 ntBASIC2.81□□□□□ -1.96
RFC5P40937 MIR5092-201ENST00000583139 88 ntBASIC2.81□□□□□ -1.96
RFC5P40937 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
RFC5P40937 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFC5P40937 RNA5SP48-201ENST00000363969 126 ntBASIC2.8□□□□□ -1.96
RFC5P40937 RNA5SP210-201ENST00000391034 120 ntBASIC2.8□□□□□ -1.96
RFC5P40937 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.8□□□□□ -1.96
RFC5P40937 SNORD111.1-201ENST00000516421 86 ntBASIC2.8□□□□□ -1.96
RFC5P40937 RNU6-762P-201ENST00000517107 102 ntBASIC2.8□□□□□ -1.96
RFC5P40937 AL357312.1-201ENST00000603879 298 ntBASIC2.8□□□□□ -1.96
RFC5P40937 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RFC5P40937 RNU4-82P-201ENST00000362443 140 ntBASIC2.79□□□□□ -1.96
RFC5P40937 RNU6-1134P-201ENST00000365156 101 ntBASIC2.79□□□□□ -1.96
RFC5P40937 AC026421.1-201ENST00000519101 163 ntBASIC2.79□□□□□ -1.96
RFC5P40937 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFC5P40937 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RFC5P40937 Y_RNA.95-201ENST00000363079 95 ntBASIC2.78□□□□□ -1.96
RFC5P40937 RNU6-60P-201ENST00000364792 103 ntBASIC2.78□□□□□ -1.96
RFC5P40937 RNU6-644P-201ENST00000391155 98 ntBASIC2.78□□□□□ -1.96
RFC5P40937 RNU6-1086P-201ENST00000410930 100 ntBASIC2.78□□□□□ -1.96
RFC5P40937 RNU7-41P-201ENST00000515917 61 ntBASIC2.78□□□□□ -1.96
RFC5P40937 MIR4439-201ENST00000583746 80 ntBASIC2.78□□□□□ -1.96
RFC5P40937 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.78□□□□□ -1.96
RFC5P40937 RNA5SP456-201ENST00000364002 114 ntBASIC2.77□□□□□ -1.97
RFC5P40937 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
RFC5P40937 MIR206-201ENST00000384872 86 ntBASIC2.77□□□□□ -1.97
RFC5P40937 MIR450A2-201ENST00000385022 100 ntBASIC2.77□□□□□ -1.97
RFC5P40937 AC244636.1-201ENST00000421152 228 ntBASIC2.77□□□□□ -1.97
RFC5P40937 RNU7-79P-201ENST00000516082 62 ntBASIC2.77□□□□□ -1.97
RFC5P40937 Y_RNA.705-201ENST00000516862 110 ntBASIC2.77□□□□□ -1.97
RFC5P40937 AL773524.1-201ENST00000614065 229 ntBASIC2.77□□□□□ -1.97
RFC5P40937 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
RFC5P40937 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RFC5P40937 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFC5P40937 Y_RNA.290-201ENST00000364879 114 ntBASIC2.76□□□□□ -1.97
RFC5P40937 SNORA6-201ENST00000384033 151 ntBASIC2.76□□□□□ -1.97
RFC5P40937 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RFC5P40937 AL359511.1-201ENST00000402970 211 ntBASIC2.76□□□□□ -1.97
RFC5P40937 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.76□□□□□ -1.97
RFC5P40937 AC024614.2-201ENST00000577584 372 ntBASIC2.76□□□□□ -1.97
RFC5P40937 U7.3-201ENST00000616123 62 ntBASIC2.76□□□□□ -1.97
RFC5P40937 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.76□□□□□ -1.97
RFC5P40937 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RFC5P40937 DEFA7P-201ENST00000382676 285 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-447P-201ENST00000410293 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-1118P-201ENST00000410382 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-1076P-201ENST00000410397 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-355P-201ENST00000410427 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-791P-201ENST00000410467 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-705P-201ENST00000410601 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-1100P-201ENST00000410691 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-860P-201ENST00000410860 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-1217P-201ENST00000411276 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RNU6-785P-201ENST00000411324 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 RPL31P63-201ENST00000422565 375 ntBASIC2.75□□□□□ -1.97
RFC5P40937 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.75□□□□□ -1.97
RFC5P40937 MIR4287-201ENST00000579398 78 ntBASIC2.75□□□□□ -1.97
RFC5P40937 MIR4777-201ENST00000583710 86 ntBASIC2.75□□□□□ -1.97
RFC5P40937 U6.90-201ENST00000614007 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 AL590808.1-201ENST00000618696 141 ntBASIC2.75□□□□□ -1.97
RFC5P40937 U6.70-201ENST00000620287 104 ntBASIC2.75□□□□□ -1.97
RFC5P40937 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFC5P40937 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFC5P40937 SNORD114-10-201ENST00000363409 72 ntBASIC2.74□□□□□ -1.97
RFC5P40937 RNU6-865P-201ENST00000364772 107 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms