Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNORD27-201ENST00000363981 72 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.307-201ENST00000365022 117 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-728P-201ENST00000365375 104 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-125P-201ENST00000384505 107 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.622-201ENST00000411091 108 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC090844.1-201ENST00000422019 156 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC244023.1-201ENST00000426884 112 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-998P-201ENST00000515894 101 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-1270P-201ENST00000517128 108 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC009779.6-201ENST00000603972 165 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 AC242498.1-201ENST00000604134 111 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HMGCLP35914 RNU6-369P-201ENST00000362515 102 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 Y_RNA.238-201ENST00000364441 102 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 MT-TG-201ENST00000387429 68 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 RNU6-918P-201ENST00000391219 106 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGCLP35914 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 U7.7-201ENST00000459276 60 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 RNY3P16-201ENST00000516338 101 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGCLP35914 MIR4264-201ENST00000583520 66 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 MIR5197-201ENST00000583721 112 ntBASIC0.73□□□□□ -2.29
HMGCLP35914 Y_RNA.75-201ENST00000362927 97 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-1189P-201ENST00000383958 107 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-574P-201ENST00000384265 107 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.477-201ENST00000384352 108 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.571-201ENST00000384753 98 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 Y_RNA.676-201ENST00000516393 96 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 RNU7-53P-201ENST00000516705 60 ntBASIC0.72□□□□□ -2.29
HMGCLP35914 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGCLP35914 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.199-201ENST00000364014 102 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 RNU6-275P-201ENST00000364910 107 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.330-201ENST00000365230 109 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 SNORA26.6-201ENST00000391256 115 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGCLP35914 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
HMGCLP35914 Y_RNA.65-201ENST00000362846 100 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 Y_RNA.308-201ENST00000365043 101 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 MIR563-201ENST00000385080 79 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HMGCLP35914 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 Y_RNA.618-201ENST00000410949 107 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 AC023827.1-201ENST00000569247 97 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 MIR378D2-201ENST00000580636 98 ntBASIC0.7□□□□□ -2.3
HMGCLP35914 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGCLP35914 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMGCLP35914 SNORA20.1-201ENST00000364790 130 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MIR624-201ENST00000385217 97 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU6-493P-201ENST00000391321 108 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGCLP35914 RNU7-67P-201ENST00000459003 62 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 SCARNA15-202ENST00000516881 127 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU6-958P-201ENST00000516995 106 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MRPS18CP4-201ENST00000535821 231 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 Z83818.1-201ENST00000603584 150 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 AP000753.3-201ENST00000604083 169 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 RNU2-4P-201ENST00000606190 192 ntBASIC0.69□□□□□ -2.3
HMGCLP35914 MIR411-201ENST00000362239 96 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.200-201ENST00000364018 102 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-597P-201ENST00000365620 102 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-643P-201ENST00000384018 107 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.430-201ENST00000384081 110 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HMGCLP35914 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-602P-201ENST00000411155 105 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 SNORD116-25-201ENST00000516517 92 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGCLP35914 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
HMGCLP35914 Y_RNA.412-201ENST00000384001 104 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 SNORA79-201ENST00000408376 140 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR548I3-201ENST00000408378 149 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL121914.1-201ENST00000450188 156 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR3129-201ENST00000581095 76 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
HMGCLP35914 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HMGCLP35914 RNU6-923P-201ENST00000364753 107 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 SNORA2B-201ENST00000384583 137 ntBASIC0.66□□□□□ -2.3
HMGCLP35914 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms