Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC112693.2-201ENST00000556538 232 ntBASIC1.31□□□□□ -2.2
RFC1P35251 MIR4251-201ENST00000635819 61 ntBASIC1.31□□□□□ -2.2
RFC1P35251 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RFC1P35251 RNU6-1062P-201ENST00000383908 107 ntBASIC1.3□□□□□ -2.2
RFC1P35251 Y_RNA.400-201ENST00000383963 111 ntBASIC1.3□□□□□ -2.2
RFC1P35251 SNORA51.10-201ENST00000384418 136 ntBASIC1.3□□□□□ -2.2
RFC1P35251 RNU6-913P-201ENST00000390913 95 ntBASIC1.3□□□□□ -2.2
RFC1P35251 SNORD37.2-201ENST00000391075 66 ntBASIC1.3□□□□□ -2.2
RFC1P35251 AC107297.1-201ENST00000459991 176 ntBASIC1.3□□□□□ -2.2
RFC1P35251 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
RFC1P35251 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
RFC1P35251 RNU6-958P-201ENST00000516995 106 ntBASIC1.3□□□□□ -2.2
RFC1P35251 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.3□□□□□ -2.2
RFC1P35251 MIR548AO-201ENST00000579992 96 ntBASIC1.3□□□□□ -2.2
RFC1P35251 AC131055.1-201ENST00000584626 316 ntBASIC1.3□□□□□ -2.2
RFC1P35251 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RFC1P35251 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
RFC1P35251 SNORA25.3-201ENST00000363205 127 ntBASIC1.29□□□□□ -2.2
RFC1P35251 Y_RNA.351-201ENST00000365436 96 ntBASIC1.29□□□□□ -2.2
RFC1P35251 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
RFC1P35251 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
RFC1P35251 RNU6-346P-201ENST00000516288 111 ntBASIC1.29□□□□□ -2.2
RFC1P35251 PRELID3BP2-201ENST00000605362 201 ntBASIC1.29□□□□□ -2.2
RFC1P35251 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
RFC1P35251 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
RFC1P35251 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RFC1P35251 Y_RNA.215-201ENST00000364204 112 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
RFC1P35251 MIR1185-1-201ENST00000408598 86 ntBASIC1.28□□□□□ -2.2
RFC1P35251 AL035398.1-201ENST00000430869 322 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RNU7-73P-201ENST00000458743 63 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RNU7-67P-201ENST00000459003 62 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RNU2-11P-201ENST00000459191 187 ntBASIC1.28□□□□□ -2.2
RFC1P35251 RNU7-96P-201ENST00000459535 64 ntBASIC1.28□□□□□ -2.2
RFC1P35251 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
RFC1P35251 AC091932.4-201ENST00000623386 200 ntBASIC1.28□□□□□ -2.2
RFC1P35251 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
RFC1P35251 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
RFC1P35251 MIR342-201ENST00000362212 99 ntBASIC1.27□□□□□ -2.21
RFC1P35251 RNU6-508P-201ENST00000363231 103 ntBASIC1.27□□□□□ -2.21
RFC1P35251 RNA5SP48-201ENST00000363969 126 ntBASIC1.27□□□□□ -2.21
RFC1P35251 RNU6-125P-201ENST00000384505 107 ntBASIC1.27□□□□□ -2.21
RFC1P35251 MIR569-201ENST00000385228 96 ntBASIC1.27□□□□□ -2.21
RFC1P35251 RNU6-1190P-201ENST00000410811 104 ntBASIC1.27□□□□□ -2.21
RFC1P35251 AL392103.1-201ENST00000447000 198 ntBASIC1.27□□□□□ -2.21
RFC1P35251 MIR8055-201ENST00000610739 97 ntBASIC1.27□□□□□ -2.21
RFC1P35251 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.26□□□□□ -2.21
RFC1P35251 RNA5SP264-201ENST00000363115 107 ntBASIC1.26□□□□□ -2.21
RFC1P35251 RNY1P5-201ENST00000383890 115 ntBASIC1.26□□□□□ -2.21
RFC1P35251 Y_RNA.584-201ENST00000391090 114 ntBASIC1.26□□□□□ -2.21
RFC1P35251 RNU6-460P-201ENST00000391158 108 ntBASIC1.26□□□□□ -2.21
RFC1P35251 AC090844.1-201ENST00000422019 156 ntBASIC1.26□□□□□ -2.21
RFC1P35251 AL603825.1-201ENST00000438481 80 ntBASIC1.26□□□□□ -2.21
RFC1P35251 snoU13.16-201ENST00000459350 104 ntBASIC1.26□□□□□ -2.21
RFC1P35251 RNA5SP272-201ENST00000516095 111 ntBASIC1.26□□□□□ -2.21
RFC1P35251 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
RFC1P35251 SNORA25.12-201ENST00000516202 82 ntBASIC1.26□□□□□ -2.21
RFC1P35251 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
RFC1P35251 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
RFC1P35251 MIR548X2-201ENST00000579776 100 ntBASIC1.26□□□□□ -2.21
RFC1P35251 snoU13.31-201ENST00000607291 104 ntBASIC1.26□□□□□ -2.21
RFC1P35251 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
RFC1P35251 SNORA26.6-201ENST00000391256 115 ntBASIC1.25□□□□□ -2.21
RFC1P35251 HMGN1P33-201ENST00000432945 451 ntBASIC1.25□□□□□ -2.21
RFC1P35251 RNU7-45P-201ENST00000459460 63 ntBASIC1.25□□□□□ -2.21
RFC1P35251 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
RFC1P35251 RNA5SP432-201ENST00000362480 116 ntBASIC1.24□□□□□ -2.21
RFC1P35251 RNU6-774P-201ENST00000363238 107 ntBASIC1.24□□□□□ -2.21
RFC1P35251 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
RFC1P35251 RNU7-80P-201ENST00000459562 61 ntBASIC1.24□□□□□ -2.21
RFC1P35251 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
RFC1P35251 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC1P35251 AL020996.3-201ENST00000606617 222 ntBASIC1.24□□□□□ -2.21
RFC1P35251 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
RFC1P35251 AL596211.1-201ENST00000569873 2277 ntBASIC1.23□□□□□ -2.21
RFC1P35251 RNU6-309P-201ENST00000364573 106 ntBASIC1.23□□□□□ -2.21
RFC1P35251 SNORA20-201ENST00000384662 132 ntBASIC1.23□□□□□ -2.21
RFC1P35251 SNORA75.2-201ENST00000391138 150 ntBASIC1.23□□□□□ -2.21
RFC1P35251 SNORA75.3-201ENST00000391231 150 ntBASIC1.23□□□□□ -2.21
RFC1P35251 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
RFC1P35251 Y_RNA.651-201ENST00000459380 103 ntBASIC1.23□□□□□ -2.21
RFC1P35251 RNU6-426P-201ENST00000516464 97 ntBASIC1.23□□□□□ -2.21
RFC1P35251 RNU7-53P-201ENST00000516705 60 ntBASIC1.23□□□□□ -2.21
RFC1P35251 MIR3133-201ENST00000583157 78 ntBASIC1.23□□□□□ -2.21
RFC1P35251 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RFC1P35251 RNU6-349P-201ENST00000362402 107 ntBASIC1.22□□□□□ -2.21
RFC1P35251 Y_RNA.120-201ENST00000363304 110 ntBASIC1.22□□□□□ -2.21
RFC1P35251 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
RFC1P35251 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
RFC1P35251 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
RFC1P35251 MIR513C-201ENST00000401352 84 ntBASIC1.22□□□□□ -2.21
RFC1P35251 MIR6516-201ENST00000630554 81 ntBASIC1.22□□□□□ -2.21
RFC1P35251 Z97988.1-201ENST00000637697 135 ntBASIC1.22□□□□□ -2.21
RFC1P35251 MIR103A2-201ENST00000362154 78 ntBASIC1.21□□□□□ -2.22
RFC1P35251 Y_RNA.420-201ENST00000384043 110 ntBASIC1.21□□□□□ -2.22
RFC1P35251 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
RFC1P35251 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
RFC1P35251 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.21□□□□□ -2.22
RFC1P35251 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms