Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL23AP6-201ENST00000446637 472 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RN7SL429P-201ENST00000479090 223 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RN7SL489P-201ENST00000486185 223 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RN7SL327P-201ENST00000488659 223 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RNU6-267P-201ENST00000516714 103 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RNU6-1006P-201ENST00000516998 103 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 MIR8055-201ENST00000610739 97 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 MIR7106-201ENST00000612419 65 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 MIR6715A-201ENST00000615929 79 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RN7SL853P-201ENST00000617250 223 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.63□□□□□ -1.99
NFKB1P19838 Y_RNA.140-201ENST00000363474 103 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 Y_RNA.247-201ENST00000364500 92 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 RNU6-342P-201ENST00000384521 104 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 UBL5P1-201ENST00000507979 193 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 SNORA74.3-201ENST00000517108 154 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 RNU7-35P-201ENST00000517174 62 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 MIR4668-201ENST00000582284 70 ntBASIC2.62□□□□□ -1.99
NFKB1P19838 SNORD58A-201ENST00000383875 65 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 RNU6-787P-201ENST00000384032 107 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 MIR206-201ENST00000384872 86 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NFKB1P19838 Y_RNA.620-201ENST00000411009 88 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 FAM106DP-201ENST00000586416 501 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
NFKB1P19838 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
NFKB1P19838 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
NFKB1P19838 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 SNORD38.1-201ENST00000363863 68 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 RNA5SP126-201ENST00000365092 109 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 RNU6-1307P-201ENST00000391012 103 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 AC245047.7-201ENST00000440265 293 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 RNU7-171P-201ENST00000459581 62 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 MIR8065-201ENST00000620577 100 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 Z97988.1-201ENST00000637697 135 ntBASIC2.6□□□□□ -1.99
NFKB1P19838 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
NFKB1P19838 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NFKB1P19838 AL445685.2-201ENST00000422551 342 ntBASIC2.59□□□□□ -1.99
NFKB1P19838 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
NFKB1P19838 MIR4666B-201ENST00000578142 81 ntBASIC2.59□□□□□ -1.99
NFKB1P19838 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
NFKB1P19838 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
NFKB1P19838 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NFKB1P19838 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
NFKB1P19838 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
NFKB1P19838 MIR449A-201ENST00000362113 91 ntBASIC2.58□□□□□ -2
NFKB1P19838 RNU6-457P-201ENST00000363999 107 ntBASIC2.58□□□□□ -2
NFKB1P19838 RNU6-1163P-201ENST00000364516 107 ntBASIC2.58□□□□□ -2
NFKB1P19838 Y_RNA.354-201ENST00000365448 111 ntBASIC2.58□□□□□ -2
NFKB1P19838 RNU7-43P-201ENST00000516554 64 ntBASIC2.58□□□□□ -2
NFKB1P19838 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
NFKB1P19838 AC103810.7-201ENST00000607821 91 ntBASIC2.58□□□□□ -2
NFKB1P19838 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.58□□□□□ -2
NFKB1P19838 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
NFKB1P19838 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NFKB1P19838 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NFKB1P19838 MIR34C-201ENST00000384831 77 ntBASIC2.57□□□□□ -2
NFKB1P19838 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
NFKB1P19838 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
NFKB1P19838 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
NFKB1P19838 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
NFKB1P19838 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.57□□□□□ -2
NFKB1P19838 AC104984.5-201ENST00000586878 94 ntBASIC2.57□□□□□ -2
NFKB1P19838 AC008133.2-201ENST00000624540 351 ntBASIC2.57□□□□□ -2
NFKB1P19838 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NFKB1P19838 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
NFKB1P19838 RNU6-279P-201ENST00000391297 101 ntBASIC2.56□□□□□ -2
NFKB1P19838 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
NFKB1P19838 RPS29P28-201ENST00000446439 141 ntBASIC2.56□□□□□ -2
NFKB1P19838 RNU6-86P-201ENST00000606534 107 ntBASIC2.56□□□□□ -2
NFKB1P19838 SEPT14P17-201ENST00000617978 177 ntBASIC2.56□□□□□ -2
NFKB1P19838 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NFKB1P19838 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
NFKB1P19838 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NFKB1P19838 RNY1P4-201ENST00000384595 115 ntBASIC2.55□□□□□ -2
NFKB1P19838 AL023284.1-201ENST00000403956 276 ntBASIC2.55□□□□□ -2
NFKB1P19838 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
NFKB1P19838 RNU6-602P-201ENST00000411155 105 ntBASIC2.55□□□□□ -2
NFKB1P19838 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
NFKB1P19838 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
NFKB1P19838 SNORD67.1-201ENST00000516618 108 ntBASIC2.55□□□□□ -2
NFKB1P19838 U1.36-201ENST00000620684 176 ntBASIC2.55□□□□□ -2
NFKB1P19838 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
NFKB1P19838 RNU6-1244P-201ENST00000363614 108 ntBASIC2.54□□□□□ -2
NFKB1P19838 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
NFKB1P19838 Y_RNA.426-201ENST00000384068 113 ntBASIC2.54□□□□□ -2
NFKB1P19838 Y_RNA.448-201ENST00000384185 108 ntBASIC2.54□□□□□ -2
NFKB1P19838 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
NFKB1P19838 MIR4764-201ENST00000580680 88 ntBASIC2.54□□□□□ -2
NFKB1P19838 AP000648.3-201ENST00000623539 4507 ntBASIC2.54□□□□□ -2
NFKB1P19838 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
NFKB1P19838 Y_RNA.244-201ENST00000364484 109 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNU6-865P-201ENST00000364772 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms