Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
SPDEFO95238 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SPDEFO95238 RNU6-1298P-201ENST00000362456 101 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 RNA5SP89-201ENST00000410300 108 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 RNU6-1190P-201ENST00000410811 104 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 RPL39P34-201ENST00000477141 156 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 MIR6717-201ENST00000622747 73 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 MIR6873-201ENST00000622788 63 ntBASIC1.73□□□□□ -2.13
SPDEFO95238 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPDEFO95238 SNORA22.1-201ENST00000362701 134 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 Y_RNA.171-201ENST00000363760 102 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 U8.6-201ENST00000364939 135 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 Y_RNA.309-201ENST00000365046 111 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU6-32P-201ENST00000383948 107 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 Y_RNA.430-201ENST00000384081 110 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU6-13P-201ENST00000384248 107 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 SNORA51.10-201ENST00000384418 136 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 Y_RNA.495-201ENST00000384435 112 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU6-12P-201ENST00000384604 107 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU6-41P-201ENST00000384741 107 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SPDEFO95238 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU7-6P-201ENST00000516845 62 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 RNU6-1258P-201ENST00000516911 111 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 MIR4764-201ENST00000580680 88 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 AC008133.2-201ENST00000624540 351 ntBASIC1.72□□□□□ -2.13
SPDEFO95238 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SPDEFO95238 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
SPDEFO95238 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SPDEFO95238 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 RNU4-82P-201ENST00000362443 140 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 RNU6-766P-201ENST00000362478 107 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 SNORD115-2-201ENST00000362842 82 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 SNORD115-20-201ENST00000365099 82 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 RNU6-439P-201ENST00000384188 106 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 MIR1302-5-201ENST00000408164 150 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 RNU7-113P-201ENST00000459273 62 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 snoU13.16-201ENST00000459350 104 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 AC068339.1-201ENST00000526965 141 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 MIR1273D-201ENST00000577266 86 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 MIR5009-201ENST00000578736 100 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 AC087741.2-201ENST00000619415 172 ntBASIC1.71□□□□□ -2.14
SPDEFO95238 Y_RNA.299-201ENST00000364973 94 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 Y_RNA.328-201ENST00000365208 113 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 MIR520C-201ENST00000385005 87 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 AL023284.1-201ENST00000403956 276 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 AC113410.1-201ENST00000505029 247 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 RNU6-322P-201ENST00000516010 103 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.7□□□□□ -2.14
SPDEFO95238 MIR4435-1-201ENST00000582552 80 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 AL162726.3-218ENST00000636401 95 ntBASIC1.7□□□□□ -2.14
SPDEFO95238 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.7□□□□□ -2.14
SPDEFO95238 SNORD115-19-201ENST00000363098 82 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 SNORD115-18-201ENST00000363293 82 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 SNORD115-17-201ENST00000364612 82 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 RNU6-756P-201ENST00000383997 107 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 SNORA51.5-201ENST00000384126 131 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 RNU4-69P-201ENST00000410677 143 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 HMGN1P33-201ENST00000432945 451 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 MIR8055-201ENST00000610739 97 ntBASIC1.69□□□□□ -2.14
SPDEFO95238 Y_RNA.470-201ENST00000384307 117 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 AL451046.2-201ENST00000403074 277 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 RNA5SP425-201ENST00000410336 112 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 RPS3AP1-201ENST00000413190 320 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.68□□□□□ -2.14
SPDEFO95238 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.68□□□□□ -2.14
SPDEFO95238 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 RNA5SP170-201ENST00000517150 101 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
SPDEFO95238 SNORA1.1-201ENST00000364671 133 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 MIR1912-201ENST00000410389 80 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.67□□□□□ -2.14
SPDEFO95238 RNA5SP33-201ENST00000516687 98 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 RNU6-537P-201ENST00000517277 103 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 AL590808.1-201ENST00000618696 141 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 ZNF355P-201ENST00000427301 3216 ntBASIC1.67□□□□□ -2.14
SPDEFO95238 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPDEFO95238 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SPDEFO95238 Y_RNA.43-201ENST00000362670 111 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 RNU6-1113P-201ENST00000384348 107 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SPDEFO95238 RNU6-816P-201ENST00000390914 107 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 RNU6-1268P-201ENST00000391214 107 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 RNU6-1239P-201ENST00000391310 107 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms