Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP1O94782 Y_RNA.140-201ENST00000363474 103 ntBASIC1.64□□□□□ -2.15
USP1O94782 RNU6-647P-201ENST00000364243 107 ntBASIC1.64□□□□□ -2.15
USP1O94782 Y_RNA.351-201ENST00000365436 96 ntBASIC1.64□□□□□ -2.15
USP1O94782 Y_RNA.617-201ENST00000410920 90 ntBASIC1.64□□□□□ -2.15
USP1O94782 Y_RNA.712-201ENST00000517011 92 ntBASIC1.64□□□□□ -2.15
USP1O94782 RNU6-902P-201ENST00000517212 91 ntBASIC1.64□□□□□ -2.15
USP1O94782 MIR3914-2-201ENST00000637339 95 ntBASIC1.64□□□□□ -2.15
USP1O94782 SNORD115-34-201ENST00000362441 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-12-201ENST00000362583 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-29-201ENST00000362834 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-9-201ENST00000362912 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-21-201ENST00000362963 81 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-14-201ENST00000363090 81 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-13-201ENST00000363358 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-41-201ENST00000363608 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-11-201ENST00000363616 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-5-201ENST00000363633 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-39-201ENST00000363694 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-4-201ENST00000363810 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-16-201ENST00000363887 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-6-201ENST00000363942 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-42-201ENST00000364273 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-15-201ENST00000364809 81 ntBASIC1.63□□□□□ -2.15
USP1O94782 RNU1-133P-201ENST00000364867 167 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-1-201ENST00000364961 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-26-201ENST00000365067 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-10-201ENST00000365073 81 ntBASIC1.63□□□□□ -2.15
USP1O94782 RNU6-690P-201ENST00000365242 106 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-43-201ENST00000365503 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-36-201ENST00000365629 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
USP1O94782 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.63□□□□□ -2.15
USP1O94782 RNU7-45P-201ENST00000459460 63 ntBASIC1.63□□□□□ -2.15
USP1O94782 RPS29P24-201ENST00000486345 171 ntBASIC1.63□□□□□ -2.15
USP1O94782 RN7SKP19-201ENST00000516016 252 ntBASIC1.63□□□□□ -2.15
USP1O94782 RNU7-70P-201ENST00000516941 66 ntBASIC1.63□□□□□ -2.15
USP1O94782 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
USP1O94782 SNORD115-40-201ENST00000606510 82 ntBASIC1.63□□□□□ -2.15
USP1O94782 AL391516.1-201ENST00000554380 2449 ntBASIC1.63□□□□□ -2.15
USP1O94782 RNU6-349P-201ENST00000362402 107 ntBASIC1.62□□□□□ -2.15
USP1O94782 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
USP1O94782 MIR1263-201ENST00000408324 86 ntBASIC1.62□□□□□ -2.15
USP1O94782 RNU6-1190P-201ENST00000410811 104 ntBASIC1.62□□□□□ -2.15
USP1O94782 RPS27P16-201ENST00000425758 201 ntBASIC1.62□□□□□ -2.15
USP1O94782 RNU6-998P-201ENST00000515894 101 ntBASIC1.62□□□□□ -2.15
USP1O94782 RNU6-322P-201ENST00000516010 103 ntBASIC1.62□□□□□ -2.15
USP1O94782 RN7SKP179-201ENST00000516126 217 ntBASIC1.62□□□□□ -2.15
USP1O94782 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USP1O94782 Y_RNA.353-201ENST00000365440 108 ntBASIC1.61□□□□□ -2.15
USP1O94782 Y_RNA.370-201ENST00000365589 108 ntBASIC1.61□□□□□ -2.15
USP1O94782 RNY1P6-201ENST00000384193 109 ntBASIC1.61□□□□□ -2.15
USP1O94782 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
USP1O94782 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
USP1O94782 MTND5P34-201ENST00000568888 325 ntBASIC1.61□□□□□ -2.15
USP1O94782 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
USP1O94782 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USP1O94782 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
USP1O94782 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
USP1O94782 MIRLET7F2-201ENST00000385277 83 ntBASIC1.6□□□□□ -2.15
USP1O94782 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
USP1O94782 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
USP1O94782 Y_RNA.629-201ENST00000411368 105 ntBASIC1.6□□□□□ -2.15
USP1O94782 RNU2-11P-201ENST00000459191 187 ntBASIC1.6□□□□□ -2.15
USP1O94782 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
USP1O94782 RNY4P20-201ENST00000516678 93 ntBASIC1.6□□□□□ -2.15
USP1O94782 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
USP1O94782 AL137067.1-201ENST00000615933 120 ntBASIC1.6□□□□□ -2.15
USP1O94782 MIR6129-201ENST00000616087 109 ntBASIC1.6□□□□□ -2.15
USP1O94782 Y_RNA.273-201ENST00000364703 102 ntBASIC1.59□□□□□ -2.15
USP1O94782 SNORD20-201ENST00000384550 80 ntBASIC1.59□□□□□ -2.15
USP1O94782 RNU6-429P-201ENST00000384582 108 ntBASIC1.59□□□□□ -2.15
USP1O94782 Y_RNA.563-201ENST00000384707 108 ntBASIC1.59□□□□□ -2.15
USP1O94782 RNU7-96P-201ENST00000459535 64 ntBASIC1.59□□□□□ -2.15
USP1O94782 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.15
USP1O94782 AC021443.1-201ENST00000604478 211 ntBASIC1.59□□□□□ -2.15
USP1O94782 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
USP1O94782 AC025166.1-201ENST00000612411 163 ntBASIC1.59□□□□□ -2.15
USP1O94782 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
USP1O94782 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
USP1O94782 RNU6-476P-201ENST00000384726 107 ntBASIC1.58□□□□□ -2.16
USP1O94782 RNU6-913P-201ENST00000390913 95 ntBASIC1.58□□□□□ -2.16
USP1O94782 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
USP1O94782 RNU7-80P-201ENST00000459562 61 ntBASIC1.58□□□□□ -2.16
USP1O94782 RNU2-13P-201ENST00000515909 113 ntBASIC1.58□□□□□ -2.16
USP1O94782 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
USP1O94782 RNU6-113P-201ENST00000516653 101 ntBASIC1.58□□□□□ -2.16
USP1O94782 RNU6-958P-201ENST00000516995 106 ntBASIC1.58□□□□□ -2.16
USP1O94782 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
USP1O94782 AC022523.2-201ENST00000561045 150 ntBASIC1.58□□□□□ -2.16
USP1O94782 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
USP1O94782 MIR4791-201ENST00000607666 84 ntBASIC1.58□□□□□ -2.16
USP1O94782 AL121890.5-201ENST00000620848 304 ntBASIC1.58□□□□□ -2.16
USP1O94782 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
USP1O94782 MTND5P18-201ENST00000445624 1801 ntBASIC1.57□□□□□ -2.16
USP1O94782 SNORA1.2-201ENST00000365189 134 ntBASIC1.57□□□□□ -2.16
USP1O94782 Y_RNA.338-201ENST00000365320 114 ntBASIC1.57□□□□□ -2.16
USP1O94782 AL035398.1-201ENST00000430869 322 ntBASIC1.57□□□□□ -2.16
USP1O94782 HMGN1P33-201ENST00000432945 451 ntBASIC1.57□□□□□ -2.16
USP1O94782 RPS29P29-201ENST00000456396 171 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms