Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RNA5SP169-201ENST00000517268 117 ntBASIC-1.24□□□□□ -2.61
PDE6DO43924 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.24□□□□□ -2.61
PDE6DO43924 MIR6841-201ENST00000637129 72 ntBASIC-1.24□□□□□ -2.61
PDE6DO43924 AC099654.14-201ENST00000638599 341 ntBASIC-1.24□□□□□ -2.61
PDE6DO43924 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 RNU6-455P-201ENST00000384681 107 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 RNU6-383P-201ENST00000410864 94 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 MTND3P10-201ENST00000450967 341 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 RNU6-126P-201ENST00000516685 103 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 RNU6-365P-201ENST00000517113 106 ntBASIC-1.25□□□□□ -2.61
PDE6DO43924 RNU6-899P-201ENST00000363947 107 ntBASIC-1.26□□□□□ -2.61
PDE6DO43924 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.26□□□□□ -2.61
PDE6DO43924 RNY1P7-201ENST00000384743 110 ntBASIC-1.26□□□□□ -2.61
PDE6DO43924 AC006362.1-201ENST00000567392 174 ntBASIC-1.26□□□□□ -2.61
PDE6DO43924 U6.92-201ENST00000636464 89 ntBASIC-1.26□□□□□ -2.61
PDE6DO43924 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 SNORA20-201ENST00000384662 132 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 RPS3AP52-201ENST00000435639 297 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 AC021146.6-201ENST00000514659 117 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 AC144568.1-201ENST00000520139 137 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.27□□□□□ -2.61
PDE6DO43924 U6.109-201ENST00000636749 87 ntBASIC-1.27□□□□□ -2.61
PDE6DO43924 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 SNORA22.1-201ENST00000362701 134 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 MIR604-201ENST00000384880 94 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 MTND2P9-201ENST00000422293 931 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 AP003733.2-201ENST00000529409 171 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 MIR548H5-201ENST00000580314 60 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 MIR3124-201ENST00000582636 67 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 PISRT1.1-201ENST00000616930 107 ntBASIC-1.28□□□□□ -2.61
PDE6DO43924 RNU4-73P-201ENST00000363164 141 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 MIR181B2-201ENST00000385004 89 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 RNU4-63P-201ENST00000411313 118 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 RNU7-4P-201ENST00000516961 62 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.29□□□□□ -2.62
PDE6DO43924 MIR5589-201ENST00000579442 60 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 MIR4473-201ENST00000583731 91 ntBASIC-1.29□□□□□ -2.62
PDE6DO43924 MIR204-201ENST00000385200 110 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 MIR548K-201ENST00000408406 116 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 RNU7-169P-201ENST00000459456 61 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 RNU7-80P-201ENST00000459562 61 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 AC091932.4-201ENST00000623386 200 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 AC090582.1-201ENST00000636321 199 ntBASIC-1.3□□□□□ -2.62
PDE6DO43924 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNA5SP257-201ENST00000363023 116 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNU4-80P-201ENST00000363200 141 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 MIR548F5-201ENST00000408421 86 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNU2-66P-201ENST00000410650 161 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNU7-79P-201ENST00000516082 62 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 RNU7-110P-201ENST00000516891 62 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 uc_338.10-201ENST00000621872 182 ntBASIC-1.31□□□□□ -2.62
PDE6DO43924 SNORD114-29-201ENST00000364819 70 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 RNU6-449P-201ENST00000383914 107 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 RNU7-74P-201ENST00000459104 62 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 RPS29P25-201ENST00000481709 171 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
PDE6DO43924 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.32□□□□□ -2.62
PDE6DO43924 RNU7-10P-201ENST00000607194 63 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 U2.1-201ENST00000618978 145 ntBASIC-1.32□□□□□ -2.62
PDE6DO43924 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 RNU1-141P-201ENST00000364623 158 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 MIR9-2-201ENST00000384838 87 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 MIR599-201ENST00000385069 95 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 MIR628-201ENST00000385229 95 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 AL603914.1-201ENST00000401964 204 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.33□□□□□ -2.62
PDE6DO43924 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.33□□□□□ -2.62
PDE6DO43924 AL445193.1-201ENST00000441183 141 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 AC074198.2-201ENST00000508153 258 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 RNU6-397P-201ENST00000516226 104 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 RNU6-175P-201ENST00000516896 107 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 MIR3920-201ENST00000581751 86 ntBASIC-1.33□□□□□ -2.62
PDE6DO43924 MIR367-201ENST00000362299 68 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 RNY3P11-201ENST00000364153 102 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 RNY1P2-201ENST00000364820 117 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 MIR196A1-201ENST00000388006 70 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 RNU6-911P-201ENST00000516523 104 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 AP001328.1-201ENST00000528550 176 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 MIR3681-201ENST00000580089 72 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 AC021613.1-201ENST00000623880 111 ntBASIC-1.34□□□□□ -2.62
PDE6DO43924 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms