Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
ITM2AO43736 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
ITM2AO43736 Y_RNA.690-201ENST00000516603 95 ntBASIC1.27□□□□□ -2.21
ITM2AO43736 MIR3121-201ENST00000579680 77 ntBASIC1.27□□□□□ -2.21
ITM2AO43736 PRELID3BP2-201ENST00000605362 201 ntBASIC1.27□□□□□ -2.21
ITM2AO43736 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ITM2AO43736 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.26□□□□□ -2.21
ITM2AO43736 Y_RNA.363-201ENST00000365529 113 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 MIR1289-2-201ENST00000408360 111 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 HMGN1P33-201ENST00000432945 451 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 AL392103.1-201ENST00000447000 198 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 AP001328.1-201ENST00000528550 176 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 AL020996.3-201ENST00000606617 222 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
ITM2AO43736 Y_RNA.280-201ENST00000364765 112 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 RNU1-133P-201ENST00000364867 167 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
ITM2AO43736 AC245047.7-201ENST00000440265 293 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 RPL39P39-201ENST00000455840 151 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 snoU13.16-201ENST00000459350 104 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 RNU7-53P-201ENST00000516705 60 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.25□□□□□ -2.21
ITM2AO43736 AC108081.1-201ENST00000604358 221 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
ITM2AO43736 RNA5SP48-201ENST00000363969 126 ntBASIC1.24□□□□□ -2.21
ITM2AO43736 Y_RNA.454-201ENST00000384224 113 ntBASIC1.24□□□□□ -2.21
ITM2AO43736 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
ITM2AO43736 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
ITM2AO43736 RNA5SP264-201ENST00000363115 107 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 SNORD18B-201ENST00000365659 72 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 SNORA40-201ENST00000388090 126 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 MTATP6P21-201ENST00000440681 189 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.23□□□□□ -2.21
ITM2AO43736 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 MIR6717-201ENST00000622747 73 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 Z97988.1-201ENST00000637697 135 ntBASIC1.23□□□□□ -2.21
ITM2AO43736 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ITM2AO43736 MIR302B-201ENST00000362188 73 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 Y_RNA.114-201ENST00000363265 113 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU4-16P-201ENST00000364737 141 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNY1P6-201ENST00000384193 109 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU6-1319P-201ENST00000390855 104 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU6-747P-201ENST00000390928 104 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU6-241P-201ENST00000391148 104 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU6-177P-201ENST00000411257 104 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU6-240P-201ENST00000516098 97 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 Y_RNA.692-201ENST00000516627 105 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 RNU7-70P-201ENST00000516941 66 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 IGKV1-22-201ENST00000524313 326 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 DNAJC19P9-201ENST00000555084 351 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 U7.2-201ENST00000607576 63 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 AC021613.1-201ENST00000623880 111 ntBASIC1.22□□□□□ -2.21
ITM2AO43736 POLR2J4-204ENST00000418424 324 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 AC244023.1-201ENST00000426884 112 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 RNU5E-3P-201ENST00000515913 68 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 RNU6-971P-201ENST00000516920 106 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 MIR3910-1-201ENST00000580936 111 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 AC242498.1-201ENST00000604134 111 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 MIR6841-201ENST00000637129 72 ntBASIC1.21□□□□□ -2.22
ITM2AO43736 Y_RNA.366-201ENST00000365540 102 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 snoU13.15-201ENST00000459407 104 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 RNU6-1258P-201ENST00000516911 111 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 TUG1_4.1-201ENST00000619464 181 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
ITM2AO43736 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNU6-654P-201ENST00000364373 107 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNU6-81P-201ENST00000365608 104 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNU6-602P-201ENST00000411155 105 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 AL158147.1-201ENST00000443970 75 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNU6-113P-201ENST00000516653 101 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 ZNF209P-201ENST00000593450 2304 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
ITM2AO43736 RNU6-235P-201ENST00000362644 107 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 Y_RNA.218-201ENST00000364218 104 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 RNU6-690P-201ENST00000365242 106 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 Y_RNA.430-201ENST00000384081 110 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 SNORA67.5-201ENST00000391036 107 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 RNA5SP144-201ENST00000410846 116 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 TMSB4XP3-201ENST00000445144 114 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms