Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-365P-201ENST00000517113 106 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 MIR8055-201ENST00000610739 97 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 AP001282.2-201ENST00000616149 309 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.116-201ENST00000363292 103 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-1227P-201ENST00000383981 107 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-484P-201ENST00000384016 107 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 SNORA27-201ENST00000384323 126 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RPS29P24-201ENST00000486345 171 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-504P-201ENST00000516568 104 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RNU7-53P-201ENST00000516705 60 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 SNORD36C-201ENST00000516733 66 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 SCARNA24.2-201ENST00000516968 130 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-958P-201ENST00000516995 106 ntBASIC0.44□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.44-201ENST00000362676 108 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.82-201ENST00000363000 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.92-201ENST00000363043 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.117-201ENST00000363294 101 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.235-201ENST00000364412 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 SNORA63C-201ENST00000364578 129 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.306-201ENST00000365015 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.312-201ENST00000365089 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.322-201ENST00000365151 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-934P-201ENST00000365154 107 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNY1P8-201ENST00000383970 114 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNY3P5-201ENST00000384127 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-1109P-201ENST00000391187 107 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 SNORA26-201ENST00000391286 122 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNA5SP247-201ENST00000411181 105 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-177P-201ENST00000411257 104 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.650-201ENST00000459002 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNA5SP153-201ENST00000516498 76 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.777-201ENST00000516982 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-570P-201ENST00000517051 105 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-1270P-201ENST00000517128 108 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.771-201ENST00000598668 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 AC097639.2-201ENST00000603159 172 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.789-201ENST00000622480 102 ntBASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAPPC4Q9Y296 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-740P-201ENST00000364734 105 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.634-201ENST00000364811 113 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 RNU1-133P-201ENST00000364867 167 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR518E-201ENST00000385252 88 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 RNU7-96P-201ENST00000459535 64 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 TRBVB-201ENST00000477100 408 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-1299P-201ENST00000516316 100 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR4804-201ENST00000581683 73 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 SNORA4-201ENST00000584302 138 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 AC044792.1-201ENST00000593294 196 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 U2.14-201ENST00000615943 113 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR6740-201ENST00000618268 113 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 MIR6513-201ENST00000621188 64 ntBASIC0.42□□□□□ -2.34
TRAPPC4Q9Y296 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 MIR335-201ENST00000362173 94 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.91-201ENST00000363042 107 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.237-201ENST00000364439 102 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-42P-201ENST00000384165 107 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.518-201ENST00000384552 113 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 SNORD38B-201ENST00000384690 67 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 MIR520H-201ENST00000385126 88 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 MIR616-201ENST00000385293 97 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 AF228730.3-201ENST00000436691 102 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-977P-201ENST00000516411 103 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 MIR4676-201ENST00000583078 72 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 uc_338.6-201ENST00000613544 171 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 SNORD38B-202ENST00000625943 69 ntBASIC0.41□□□□□ -2.34
TRAPPC4Q9Y296 snoU2_19.4-201ENST00000364329 80 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.410-201ENST00000383992 113 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.432-201ENST00000384087 111 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-602P-201ENST00000411155 105 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 MIR18B-201ENST00000454574 71 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-998P-201ENST00000515894 101 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 MIR4282-201ENST00000583613 67 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 AC020891.4-201ENST00000605745 93 ntBASIC0.4□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.11-201ENST00000362375 109 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 SNORA1.1-201ENST00000364671 133 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.304-201ENST00000365011 112 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.354-201ENST00000365448 111 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 Y_RNA.440-201ENST00000384120 114 ntBASIC0.39□□□□□ -2.35
TRAPPC4Q9Y296 RNU6-713P-201ENST00000384761 107 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 296.6 ms