Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 AC110079.1-202ENST00000635213 138 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 HSPE1P9-201ENST00000440046 311 ntBASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 RPS27P21-201ENST00000486977 252 ntBASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 SNORD92-201ENST00000585078 85 ntBASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM35Q9UPQ4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 RNA5SP383-201ENST00000362934 120 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-154P-201ENST00000384306 106 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 SNORA44-201ENST00000384584 132 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 AC110620.1-201ENST00000416042 228 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 CYP3A52P-201ENST00000563326 91 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 MIR4500-201ENST00000579472 76 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 AL353746.1-201ENST00000566293 6881 ntBASIC3.95□□□□□ -1.78
TRIM35Q9UPQ4 Y_RNA.283-201ENST00000364798 112 ntBASIC3.94□□□□□ -1.78
TRIM35Q9UPQ4 MIR3169-201ENST00000578032 83 ntBASIC3.94□□□□□ -1.78
TRIM35Q9UPQ4 AC069114.2-201ENST00000604699 304 ntBASIC3.94□□□□□ -1.78
TRIM35Q9UPQ4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM35Q9UPQ4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-681P-201ENST00000364012 104 ntBASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-1019P-201ENST00000364424 107 ntBASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 SNORA71.1-201ENST00000364523 117 ntBASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 AC141846.1-201ENST00000568348 142 ntBASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 AL033523.1-201ENST00000605153 153 ntBASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TRIM35Q9UPQ4 WWP1P1-201ENST00000466609 2769 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 SNORD36A-201ENST00000362874 73 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-805P-201ENST00000365643 106 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-950P-201ENST00000384651 107 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 SNORA46-201ENST00000384762 135 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 MIR483-201ENST00000385070 76 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 SNORD90-201ENST00000391145 111 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 RNU6-977P-201ENST00000516411 103 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 AL162274.2-201ENST00000614406 332 ntBASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRIM35Q9UPQ4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM35Q9UPQ4 SNORA25B-201ENST00000365507 128 ntBASIC3.91□□□□□ -1.78
TRIM35Q9UPQ4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM35Q9UPQ4 AL139132.1-201ENST00000431587 344 ntBASIC3.91□□□□□ -1.78
TRIM35Q9UPQ4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TRIM35Q9UPQ4 MIR148B-201ENST00000362252 99 ntBASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 RNA5SP237-201ENST00000410414 113 ntBASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 AC027119.1-201ENST00000440877 241 ntBASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM35Q9UPQ4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 MIRLET7F1-201ENST00000362202 87 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-23P-201ENST00000363283 107 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-291P-201ENST00000384720 107 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 MIR526A1-201ENST00000384897 85 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-1254P-201ENST00000391266 104 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 AL159169.1-201ENST00000421119 127 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 snoU13.17-201ENST00000458802 104 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 AC023141.11-201ENST00000508864 202 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 AC138749.4-201ENST00000563970 127 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 AC022513.1-201ENST00000624512 117 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM35Q9UPQ4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 SNORD45A-201ENST00000384512 84 ntBASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-243P-201ENST00000391140 107 ntBASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-466P-201ENST00000391224 103 ntBASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 BX276092.1-201ENST00000427368 251 ntBASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
TRIM35Q9UPQ4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-949P-201ENST00000384040 107 ntBASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 MIR518E-201ENST00000385252 88 ntBASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 RNU6-881P-201ENST00000516813 102 ntBASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM35Q9UPQ4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms