Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
Q9N2J8 RPS29P24-201ENST00000486345 171 ntBASIC1.35□□□□□ -2.19
Q9N2J8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.35□□□□□ -2.19
Q9N2J8 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
Q9N2J8 MIR3192-201ENST00000584920 77 ntBASIC1.35□□□□□ -2.19
Q9N2J8 MIR4251-201ENST00000635819 61 ntBASIC1.35□□□□□ -2.19
Q9N2J8 MIR3658-201ENST00000636291 56 ntBASIC1.35□□□□□ -2.19
Q9N2J8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.35□□□□□ -2.19
Q9N2J8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Q9N2J8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU6-818P-201ENST00000364837 108 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.34□□□□□ -2.19
Q9N2J8 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
Q9N2J8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU7-67P-201ENST00000459003 62 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU7-96P-201ENST00000459535 64 ntBASIC1.34□□□□□ -2.19
Q9N2J8 AL133373.1-201ENST00000497098 94 ntBASIC1.34□□□□□ -2.19
Q9N2J8 RNU6-1212P-201ENST00000517023 104 ntBASIC1.34□□□□□ -2.19
Q9N2J8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.34□□□□□ -2.19
Q9N2J8 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
Q9N2J8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
Q9N2J8 MIR376A2-201ENST00000636782 80 ntBASIC1.34□□□□□ -2.19
Q9N2J8 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.2
Q9N2J8 RNU6-151P-201ENST00000364158 107 ntBASIC1.33□□□□□ -2.2
Q9N2J8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.33□□□□□ -2.2
Q9N2J8 Y_RNA.398-201ENST00000383952 99 ntBASIC1.33□□□□□ -2.2
Q9N2J8 RNU6-588P-201ENST00000410281 105 ntBASIC1.33□□□□□ -2.2
Q9N2J8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.33□□□□□ -2.2
Q9N2J8 RNU7-80P-201ENST00000459562 61 ntBASIC1.33□□□□□ -2.2
Q9N2J8 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
Q9N2J8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
Q9N2J8 AC104984.5-201ENST00000586878 94 ntBASIC1.33□□□□□ -2.2
Q9N2J8 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
Q9N2J8 MIR6715A-201ENST00000615929 79 ntBASIC1.33□□□□□ -2.2
Q9N2J8 AL353997.5-201ENST00000618886 171 ntBASIC1.33□□□□□ -2.2
Q9N2J8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Q9N2J8 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
Q9N2J8 RNU4-11P-201ENST00000365287 132 ntBASIC1.32□□□□□ -2.2
Q9N2J8 Y_RNA.454-201ENST00000384224 113 ntBASIC1.32□□□□□ -2.2
Q9N2J8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
Q9N2J8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
Q9N2J8 AL035398.1-201ENST00000430869 322 ntBASIC1.32□□□□□ -2.2
Q9N2J8 RNU6-998P-201ENST00000515894 101 ntBASIC1.32□□□□□ -2.2
Q9N2J8 RNU7-70P-201ENST00000516941 66 ntBASIC1.32□□□□□ -2.2
Q9N2J8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.32□□□□□ -2.2
Q9N2J8 AC131055.1-201ENST00000584626 316 ntBASIC1.32□□□□□ -2.2
Q9N2J8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.31□□□□□ -2.2
Q9N2J8 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
Q9N2J8 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
Q9N2J8 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
Q9N2J8 RNU6-958P-201ENST00000516995 106 ntBASIC1.31□□□□□ -2.2
Q9N2J8 AC112693.2-201ENST00000556538 232 ntBASIC1.31□□□□□ -2.2
Q9N2J8 MIR4303-201ENST00000581299 66 ntBASIC1.31□□□□□ -2.2
Q9N2J8 AC021753.1-201ENST00000635724 168 ntBASIC1.31□□□□□ -2.2
Q9N2J8 Y_RNA.52-201ENST00000362760 96 ntBASIC1.3□□□□□ -2.2
Q9N2J8 RNU7-73P-201ENST00000458743 63 ntBASIC1.3□□□□□ -2.2
Q9N2J8 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
Q9N2J8 SNORA31.4-201ENST00000516049 129 ntBASIC1.3□□□□□ -2.2
Q9N2J8 RNU6-1149P-201ENST00000516810 97 ntBASIC1.3□□□□□ -2.2
Q9N2J8 SCARNA15-202ENST00000516881 127 ntBASIC1.3□□□□□ -2.2
Q9N2J8 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
Q9N2J8 MIR4524B-201ENST00000581569 115 ntBASIC1.3□□□□□ -2.2
Q9N2J8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.3□□□□□ -2.2
Q9N2J8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
Q9N2J8 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
Q9N2J8 MIR302B-201ENST00000362188 73 ntBASIC1.29□□□□□ -2.2
Q9N2J8 MIR342-201ENST00000362212 99 ntBASIC1.29□□□□□ -2.2
Q9N2J8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.29□□□□□ -2.2
Q9N2J8 MIR513C-201ENST00000401352 84 ntBASIC1.29□□□□□ -2.2
Q9N2J8 AC009474.2-201ENST00000451383 136 ntBASIC1.29□□□□□ -2.2
Q9N2J8 RNU2-11P-201ENST00000459191 187 ntBASIC1.29□□□□□ -2.2
Q9N2J8 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
Q9N2J8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
Q9N2J8 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
Q9N2J8 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
Q9N2J8 RNA5SP264-201ENST00000363115 107 ntBASIC1.28□□□□□ -2.2
Q9N2J8 SNORA25.3-201ENST00000363205 127 ntBASIC1.28□□□□□ -2.2
Q9N2J8 RNU1-133P-201ENST00000364867 167 ntBASIC1.28□□□□□ -2.2
Q9N2J8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.28□□□□□ -2.2
Q9N2J8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.28□□□□□ -2.2
Q9N2J8 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
Q9N2J8 MTND5P41-201ENST00000517498 206 ntBASIC1.28□□□□□ -2.2
Q9N2J8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.28□□□□□ -2.2
Q9N2J8 AC091932.4-201ENST00000623386 200 ntBASIC1.28□□□□□ -2.2
Q9N2J8 MIR103A2-201ENST00000362154 78 ntBASIC1.27□□□□□ -2.21
Q9N2J8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.27□□□□□ -2.21
Q9N2J8 RNU6-482P-201ENST00000391068 107 ntBASIC1.27□□□□□ -2.21
Q9N2J8 MTATP6P21-201ENST00000440681 189 ntBASIC1.27□□□□□ -2.21
Q9N2J8 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
Q9N2J8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.27□□□□□ -2.21
Q9N2J8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Q9N2J8 AL596211.1-201ENST00000569873 2277 ntBASIC1.27□□□□□ -2.21
Q9N2J8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.26□□□□□ -2.21
Q9N2J8 RNU6-1062P-201ENST00000383908 107 ntBASIC1.26□□□□□ -2.21
Q9N2J8 RNU7-200P-201ENST00000516105 62 ntBASIC1.26□□□□□ -2.21
Q9N2J8 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
Q9N2J8 RNU11-2P-201ENST00000516898 142 ntBASIC1.26□□□□□ -2.21
Q9N2J8 RNU6-255P-201ENST00000516957 105 ntBASIC1.26□□□□□ -2.21
Q9N2J8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms