Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-693P-201ENST00000516134 107 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 AC134878.1-201ENST00000619901 243 ntBASIC1.1□□□□□ -2.23
POLR1BQ9H9Y6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC008163.1-202ENST00000636004 2889 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 RNY4P28-201ENST00000365281 93 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNORA24-201ENST00000384096 131 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNORA40.5-201ENST00000391061 128 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 SNRPGP8-201ENST00000454064 226 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC007751.1-201ENST00000529260 376 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 MIR6779-201ENST00000617283 64 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AC243994.1-201ENST00000618627 109 ntBASIC1.09□□□□□ -2.23
POLR1BQ9H9Y6 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 SNORD61-201ENST00000384252 73 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 MIR518F-201ENST00000384973 87 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 RNU4-71P-201ENST00000516258 113 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 AL162730.1-201ENST00000605734 292 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 7SK.10-201ENST00000621414 298 ntBASIC1.08□□□□□ -2.24
POLR1BQ9H9Y6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-728P-201ENST00000365375 104 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-463P-201ENST00000384340 107 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MIR548A2-201ENST00000384956 97 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MT-TT-201ENST00000387460 66 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 SNORA79-201ENST00000408376 140 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU4-43P-201ENST00000410628 137 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 snoU13.16-201ENST00000459350 104 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 MIR4503-201ENST00000582187 83 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
POLR1BQ9H9Y6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 SNORD27-201ENST00000363981 72 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MTND1P19-201ENST00000511780 315 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-197P-201ENST00000516680 100 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-453P-201ENST00000516819 85 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AP003484.1-201ENST00000530974 250 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC004817.2-201ENST00000561794 651 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MIR3149-201ENST00000584629 83 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 AP000942.4-201ENST00000604811 241 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 MTND1P7-201ENST00000632801 297 ntBASIC1.06□□□□□ -2.24
POLR1BQ9H9Y6 SNORD45.3-201ENST00000363836 72 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 MIR4744-201ENST00000581563 82 ntBASIC1.05□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 MT-TN-201ENST00000387400 73 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-938P-201ENST00000411285 103 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.144-201ENST00000363521 113 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA20.1-201ENST00000364790 130 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA27-201ENST00000384323 126 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-73P-201ENST00000458743 63 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-67P-201ENST00000459003 62 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 RNU7-53P-201ENST00000516705 60 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 MIR3128-201ENST00000581957 66 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 MIR6516-201ENST00000630554 81 ntBASIC1.03□□□□□ -2.24
POLR1BQ9H9Y6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC131055.1-201ENST00000584626 316 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
POLR1BQ9H9Y6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 776.8 ms