Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MIR5692C2-201ENST00000577959 77 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.241-201ENST00000364470 117 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 SNORD81.2-201ENST00000365153 76 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.439-201ENST00000384119 94 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 RNU6-890P-201ENST00000384121 107 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.547-201ENST00000384654 119 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.644-201ENST00000459006 113 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 RNA5SP227-201ENST00000516184 113 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 RNA5SP94-201ENST00000516917 108 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0□□□□□ -2.41
SHANK3Q9BYB0 MIR3678-201ENST00000578455 94 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 MIR4662B-201ENST00000579498 81 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 AC013791.1-201ENST00000616619 62 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 MIR6740-201ENST00000618268 113 ntBASIC0□□□□□ -2.41
SHANK3Q9BYB0 SNORA1.1-201ENST00000364671 133 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 SNORA8.2-201ENST00000384372 139 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-469P-201ENST00000516253 101 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 MIR4423-201ENST00000580922 80 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RPS29P30-201ENST00000600975 111 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 AC092794.1-201ENST00000612734 582 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 MTND4LP30-201ENST00000454092 297 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU2-11P-201ENST00000459191 187 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-135P-201ENST00000516769 101 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 AC005357.1-201ENST00000588399 301 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 uc_338.6-201ENST00000613544 171 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 AL606534.2-204ENST00000635008 178 ntBASIC-0.01□□□□□ -2.41
SHANK3Q9BYB0 RNY3P11-201ENST00000364153 102 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU4-50P-201ENST00000364361 141 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 MIR563-201ENST00000385080 79 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 MT-TQ-201ENST00000387372 72 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 MIR892B-201ENST00000401279 77 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 MIR1278-201ENST00000408753 81 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU2-14P-201ENST00000411053 191 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 AL512326.2-201ENST00000426359 151 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU7-152P-201ENST00000458982 64 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RPS29P24-201ENST00000486345 171 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU6-764P-201ENST00000516396 105 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 SNORA18.4-201ENST00000516440 124 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU7-25P-201ENST00000516544 62 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU6-365P-201ENST00000517113 106 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.02□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 SNORA26-201ENST00000391286 122 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 AL590004.1-201ENST00000405321 300 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 MIR1257-201ENST00000408490 117 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 AC096644.2-201ENST00000429278 159 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 AL160004.2-201ENST00000432935 350 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 RPL39P25-201ENST00000449384 154 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 MIR3152-201ENST00000579801 74 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 AC008608.1-201ENST00000603910 127 ntBASIC-0.03□□□□□ -2.41
SHANK3Q9BYB0 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU6-740P-201ENST00000364734 105 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 SNORD116-29-201ENST00000384516 83 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 MIR559-201ENST00000385188 96 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 SNORD77.3-201ENST00000391113 65 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU2-55P-201ENST00000411146 174 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 AC091959.1-201ENST00000495857 238 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU7-53P-201ENST00000516705 60 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 AC007751.1-201ENST00000529260 376 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 MIR4724-201ENST00000579485 89 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 MIR3145-201ENST00000580727 82 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 AC099654.14-201ENST00000638599 341 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU6-815P-201ENST00000384080 113 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU6-708P-201ENST00000384217 107 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNA5SP261-201ENST00000410536 106 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 MTND4P17-201ENST00000470444 350 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 RNU6-504P-201ENST00000516568 104 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 SNORA25.18-201ENST00000607153 114 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 AC084782.3-201ENST00000612282 578 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 U6atac.1-201ENST00000616025 117 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 MIR4272-201ENST00000635924 64 ntBASIC-0.04□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms