Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU7-67P-201ENST00000459003 62 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 AC113410.1-201ENST00000505029 247 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 AC087741.2-201ENST00000619415 172 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
TRIM56Q9BRZ2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM56Q9BRZ2 SNORD77B-201ENST00000391112 67 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 RN7SKP192-201ENST00000411291 327 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 SNORA31.4-201ENST00000516049 129 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 MIR3618-201ENST00000580330 88 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
TRIM56Q9BRZ2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM56Q9BRZ2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TRIM56Q9BRZ2 MIR424-201ENST00000362227 98 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 RNY3P2-201ENST00000362918 102 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 Y_RNA.155-201ENST00000363632 101 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 RNU6-1067P-201ENST00000384752 107 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 RNU4-69P-201ENST00000410677 143 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 SCARNA23-201ENST00000516060 130 ntBASIC2.54□□□□□ -2
TRIM56Q9BRZ2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
TRIM56Q9BRZ2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM56Q9BRZ2 SNORA22.1-201ENST00000362701 134 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 RNU6-363P-201ENST00000362895 105 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 MIR488-201ENST00000365739 83 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 SNORA24-201ENST00000384096 131 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 RNU6-409P-201ENST00000384114 104 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 SNORA26.2-201ENST00000390922 122 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 AC093850.1-201ENST00000454121 251 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 RNU6-958P-201ENST00000516995 106 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 AC095038.3-201ENST00000634439 195 ntBASIC2.53□□□□□ -2
TRIM56Q9BRZ2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
TRIM56Q9BRZ2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 SNORD115-2-201ENST00000362842 82 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 SNORD115-20-201ENST00000365099 82 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.601-201ENST00000410500 113 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-733P-201ENST00000410759 104 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNA5SP508-201ENST00000411327 119 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNU7-73P-201ENST00000458743 63 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNU7-45P-201ENST00000459460 63 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 SNORD123-201ENST00000459473 70 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNA5SP320-201ENST00000516263 124 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 MIR4694-201ENST00000578534 80 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 AL442128.1-201ENST00000615151 90 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 MALAT1.1-201ENST00000618249 95 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 SNORD3E-202ENST00000627253 216 ntBASIC2.52□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.171-201ENST00000363760 102 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 RNU4-67P-201ENST00000364569 141 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 AC055731.1-201ENST00000474387 401 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 RNU2-13P-201ENST00000515909 113 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 AL513534.2-201ENST00000603836 250 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 AC064859.1-201ENST00000624741 174 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 MIR6841-201ENST00000637129 72 ntBASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM56Q9BRZ2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-1099P-201ENST00000363533 107 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.430-201ENST00000384081 110 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 RNA5SP212-201ENST00000391223 107 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 RNA5SP33-201ENST00000516687 98 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-844P-201ENST00000517175 102 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 MIR1255B1-201ENST00000636325 63 ntBASIC2.5□□□□□ -2.01
TRIM56Q9BRZ2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.360-201ENST00000365512 102 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.537-201ENST00000384626 109 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 SNORA67.4-201ENST00000384688 142 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 RNY4P29-201ENST00000410801 97 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.773-201ENST00000607168 90 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 MIR4791-201ENST00000607666 84 ntBASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
TRIM56Q9BRZ2 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 Y_RNA.466-201ENST00000384294 113 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 MIR526A1-201ENST00000384897 85 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 SNORA26.6-201ENST00000391256 115 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 MIR548AR-201ENST00000582191 57 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 AL020996.3-201ENST00000606617 222 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 AC103810.6-201ENST00000606708 136 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 MIR6817-201ENST00000615588 66 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 MIR6717-201ENST00000622747 73 ntBASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM56Q9BRZ2 AP000648.3-201ENST00000623539 4507 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 RNU6-832P-201ENST00000363319 107 ntBASIC2.47□□□□□ -2.01
TRIM56Q9BRZ2 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms