Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU6-648P-201ENST00000410190 107 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU6-710P-201ENST00000410424 105 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU2-14P-201ENST00000411053 191 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 MTND1P27-201ENST00000451117 902 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 snoU13.13-201ENST00000458842 104 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU6-835P-201ENST00000516974 104 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 MIR3920-201ENST00000581751 86 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 DEFB117-201ENST00000602356 141 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 uc_338.19-201ENST00000616808 99 ntBASIC-1.34□□□□□ -2.62
VPS25Q9BRG1 MIR302B-201ENST00000362188 73 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 RNU6-626P-201ENST00000363354 107 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 SNORD114-29-201ENST00000364819 70 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 RNY1P2-201ENST00000364820 117 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 MT-TH-201ENST00000387441 69 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AL603914.1-201ENST00000401964 204 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 RNU7-141P-201ENST00000459304 62 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC083798.1-201ENST00000472671 131 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 RNU6-232P-201ENST00000517144 64 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 MIR3915-201ENST00000578518 97 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 YWHAEP2-201ENST00000580066 112 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC073648.5-201ENST00000603502 305 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC011476.5-201ENST00000615594 130 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 AC079248.2-201ENST00000623779 326 ntBASIC-1.35□□□□□ -2.63
VPS25Q9BRG1 SNORD116-11-201ENST00000383882 92 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 SNORD61-201ENST00000384252 73 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-900P-201ENST00000384498 102 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-831P-201ENST00000384548 107 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 AF228730.3-201ENST00000436691 102 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 RNU6-273P-201ENST00000516937 96 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 MIR3179-1-201ENST00000578940 84 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 MIR3179-2-201ENST00000579107 84 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 MIR3179-3-201ENST00000579566 84 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 AL049861.1-201ENST00000603130 150 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 MIR3179-4-201ENST00000617599 84 ntBASIC-1.36□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 RNU6-154P-201ENST00000384306 106 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR599-201ENST00000385069 95 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR517B-201ENST00000385102 67 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 SNORA26.8-201ENST00000391306 124 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 RNA5SP25-201ENST00000410815 110 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 RNU6-274P-201ENST00000459566 107 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR4499-201ENST00000584834 69 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR4324-201ENST00000584846 72 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR1244-1-201ENST00000612829 85 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR6738-201ENST00000619620 64 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR1244-3-201ENST00000635744 85 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR1244-2-201ENST00000636449 85 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 MIR1244-4-202ENST00000636813 85 ntBASIC-1.37□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.38□□□□□ -2.63
VPS25Q9BRG1 MIR3145-201ENST00000580727 82 ntBASIC-1.38□□□□□ -2.63
VPS25Q9BRG1 MIR3942-201ENST00000585264 109 ntBASIC-1.38□□□□□ -2.63
VPS25Q9BRG1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.38□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 MIR1265-201ENST00000408444 86 ntBASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 MIR4528-201ENST00000577763 90 ntBASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 AC107308.1-201ENST00000615897 301 ntBASIC-1.39□□□□□ -2.63
VPS25Q9BRG1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 RNA5SP261-201ENST00000410536 106 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 TRAJ51-201ENST00000504127 63 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 SNORD22.1-201ENST00000516331 125 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 MIR6841-201ENST00000637129 72 ntBASIC-1.4□□□□□ -2.63
VPS25Q9BRG1 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 AC074085.1-201ENST00000413598 418 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 MIR378F-201ENST00000578143 78 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 MIR548H5-201ENST00000580314 60 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 MIR6128-201ENST00000615528 109 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 AC069503.3-201ENST00000618674 145 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 U4.1-201ENST00000620349 87 ntBASIC-1.41□□□□□ -2.64
VPS25Q9BRG1 SNORA22.1-201ENST00000362701 134 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU6-449P-201ENST00000383914 107 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU6-383P-201ENST00000410864 94 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU7-79P-201ENST00000516082 62 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNU7-13P-201ENST00000516413 62 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 MIR5704-201ENST00000584029 77 ntBASIC-1.42□□□□□ -2.64
VPS25Q9BRG1 MIR376A2-201ENST00000636782 80 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms