Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 AC021506.2-201ENST00000612354 169 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 RNU7-164P-201ENST00000459221 62 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 HSPE1P19-201ENST00000603327 295 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 MIR302B-201ENST00000362188 73 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-34-201ENST00000362441 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-12-201ENST00000362583 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-29-201ENST00000362834 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-9-201ENST00000362912 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-21-201ENST00000362963 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-14-201ENST00000363090 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-13-201ENST00000363358 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-41-201ENST00000363608 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-11-201ENST00000363616 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-5-201ENST00000363633 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-39-201ENST00000363694 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-4-201ENST00000363810 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-16-201ENST00000363887 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-6-201ENST00000363942 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-42-201ENST00000364273 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU4-16P-201ENST00000364737 141 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-15-201ENST00000364809 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-1-201ENST00000364961 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-26-201ENST00000365067 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-10-201ENST00000365073 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-43-201ENST00000365503 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-36-201ENST00000365629 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU6-147P-201ENST00000383983 107 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR136-201ENST00000385207 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR759-201ENST00000390224 91 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC107297.1-201ENST00000459991 176 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU6-412P-201ENST00000516434 106 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-40-201ENST00000606510 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR6715A-201ENST00000615929 79 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD3E-202ENST00000627253 216 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RPS29P24-201ENST00000486345 171 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNU6-998P-201ENST00000515894 101 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR4305-201ENST00000583252 102 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AC104984.5-201ENST00000586878 94 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AL513423.1-201ENST00000621695 132 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 MIR660-201ENST00000385235 97 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 SNORD12C-201ENST00000386307 89 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AL035398.1-201ENST00000430869 322 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 RNU7-123P-201ENST00000515911 60 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 AL442644.1-201ENST00000454390 3105 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNY4P6-201ENST00000363667 96 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNU2-11P-201ENST00000459191 187 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 SNORA31.17-201ENST00000516953 127 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR4679-2-201ENST00000578358 77 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 uc_338.28-201ENST00000612082 187 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR450A1-201ENST00000362262 91 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 SNORA63.5-201ENST00000363548 123 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR526A1-201ENST00000384897 85 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 AL031737.1-201ENST00000450125 223 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 RNU7-67P-201ENST00000459003 62 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 734.7 ms