Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORD24-201ENST00000383884 75 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 Y_RNA.527-201ENST00000384573 102 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 Y_RNA.535-201ENST00000384612 99 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 RNU7-62P-201ENST00000458856 62 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 RNU6-693P-201ENST00000516134 107 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 AP003733.2-201ENST00000529409 171 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 AL162730.1-201ENST00000605734 292 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.42□□□□□ -2.34
VMP1Q96GC9 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 Y_RNA.152-201ENST00000363578 100 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 RNU4-10P-201ENST00000364383 140 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 SNORA63C-201ENST00000364578 129 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 MIR548A2-201ENST00000384956 97 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 RNU6-913P-201ENST00000390913 95 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 AC015818.7-201ENST00000428754 109 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 AC087499.7-201ENST00000441958 109 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 AL731563.1-201ENST00000442202 214 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 AC006006.1-201ENST00000603082 144 ntBASIC0.41□□□□□ -2.34
VMP1Q96GC9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.41□□□□□ -2.34
VMP1Q96GC9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
VMP1Q96GC9 Y_RNA.61-201ENST00000362835 102 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 RNU5E-4P-201ENST00000364931 120 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 SNORD61-201ENST00000384252 73 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 SNORA27-201ENST00000384323 126 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 SNORD38B-201ENST00000384690 67 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
VMP1Q96GC9 SERF1AP1-201ENST00000514575 187 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 RNU7-53P-201ENST00000516705 60 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 RNU6-365P-201ENST00000517113 106 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 AC100767.1-201ENST00000528178 123 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.4□□□□□ -2.35
VMP1Q96GC9 MIR3612-201ENST00000579753 87 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 MIR4680-201ENST00000580906 66 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.4□□□□□ -2.35
VMP1Q96GC9 MIR8055-201ENST00000610739 97 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 MIR7111-201ENST00000619751 72 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 SNORD38B-202ENST00000625943 69 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 Z97988.1-201ENST00000637697 135 ntBASIC0.4□□□□□ -2.35
VMP1Q96GC9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.39□□□□□ -2.35
VMP1Q96GC9 RNU6-888P-201ENST00000363010 101 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 Y_RNA.84-201ENST00000363011 104 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 RNU6-867P-201ENST00000364956 107 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 RNU6-211P-201ENST00000384047 107 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 SNORA8.3-201ENST00000384679 139 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
VMP1Q96GC9 RPS29P24-201ENST00000486345 171 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 SNORD36C-201ENST00000516733 66 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 RNU6-1270P-201ENST00000517128 108 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 MIR3171-201ENST00000584270 74 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 AC020891.4-201ENST00000605745 93 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.39□□□□□ -2.35
VMP1Q96GC9 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
VMP1Q96GC9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
VMP1Q96GC9 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 Y_RNA.153-201ENST00000363615 91 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 Y_RNA.216-201ENST00000364205 93 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
VMP1Q96GC9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.38□□□□□ -2.35
VMP1Q96GC9 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 RNU6-504P-201ENST00000516568 104 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.38□□□□□ -2.35
VMP1Q96GC9 AC020661.2-201ENST00000560114 134 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 MIR6740-201ENST00000618268 113 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.38□□□□□ -2.35
VMP1Q96GC9 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 Y_RNA.572-201ENST00000384757 98 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 MIR626-201ENST00000385032 94 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 MIR613-201ENST00000385248 95 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 MTND5P22-201ENST00000458380 195 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 RNU6-1338P-201ENST00000516328 91 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 SCARNA24.2-201ENST00000516968 130 ntBASIC0.37□□□□□ -2.35
VMP1Q96GC9 AC010332.2-201ENST00000613083 1904 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 SNORA1.1-201ENST00000364671 133 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 MIR588-201ENST00000384900 83 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 SNORA26-201ENST00000391286 122 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 MIR938-201ENST00000401216 83 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 RNU2-55P-201ENST00000411146 174 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 AC113618.1-201ENST00000416747 285 ntBASIC0.36□□□□□ -2.35
VMP1Q96GC9 MIR18B-201ENST00000454574 71 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms