Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 RNU2-31P-201ENST00000516954 155 ntBASIC0.39□□□□□ -2.35
PHF3Q92576 RNU6-958P-201ENST00000516995 106 ntBASIC0.39□□□□□ -2.35
PHF3Q92576 RNU6-1270P-201ENST00000517128 108 ntBASIC0.39□□□□□ -2.35
PHF3Q92576 MIR8055-201ENST00000610739 97 ntBASIC0.39□□□□□ -2.35
PHF3Q92576 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.39□□□□□ -2.35
PHF3Q92576 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 Y_RNA.28-201ENST00000362554 111 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 AC107297.1-201ENST00000459991 176 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 RNU6-1338P-201ENST00000516328 91 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 SCARNA24.2-201ENST00000516968 130 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.38□□□□□ -2.35
PHF3Q92576 MTND4P29-201ENST00000503122 1372 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 SNORA25.1-201ENST00000362326 128 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 Y_RNA.66-201ENST00000362862 102 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 RNA5SP457-201ENST00000363657 124 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 Y_RNA.389-201ENST00000383924 113 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 MT-TF-201ENST00000387314 71 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 Y_RNA.637-201ENST00000459424 114 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 AC131281.1-201ENST00000522984 164 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 MIR4771-2-201ENST00000577758 74 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 MIR4771-1-201ENST00000582617 74 ntBASIC0.38□□□□□ -2.35
PHF3Q92576 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.38□□□□□ -2.35
PHF3Q92576 SNORA63C-201ENST00000364578 129 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 Y_RNA.258-201ENST00000364613 105 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 RNU6-806P-201ENST00000365147 105 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 SNORA26-201ENST00000391286 122 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 MTATP6P23-201ENST00000440153 476 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 SNORA27.4-201ENST00000516650 95 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 MIR3171-201ENST00000584270 74 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 Y_RNA.37-201ENST00000362606 108 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 Y_RNA.535-201ENST00000384612 99 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 Y_RNA.547-201ENST00000384654 119 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 RNU7-102P-201ENST00000458948 62 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 RNU6-570P-201ENST00000517051 105 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
PHF3Q92576 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
PHF3Q92576 Y_RNA.30-201ENST00000362572 97 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 Y_RNA.128-201ENST00000363391 112 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 RNU6-867P-201ENST00000364956 107 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 RNU6-728P-201ENST00000365375 104 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
PHF3Q92576 RNY3P5-201ENST00000384127 102 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 MIR548P-201ENST00000408336 84 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 MIR548I3-201ENST00000408378 149 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 AC091959.1-201ENST00000495857 238 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.36□□□□□ -2.35
PHF3Q92576 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.36□□□□□ -2.35
PHF3Q92576 Z97988.1-201ENST00000637697 135 ntBASIC0.36□□□□□ -2.35
PHF3Q92576 Y_RNA.26-201ENST00000362539 101 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.138-201ENST00000363462 102 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.158-201ENST00000363651 101 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.275-201ENST00000364726 110 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 RNY1P8-201ENST00000383970 114 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.460-201ENST00000384255 102 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 MIR526A2-201ENST00000390198 65 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 AP001094.1-201ENST00000579805 193 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
PHF3Q92576 MIR367-201ENST00000362299 68 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.455-201ENST00000384230 98 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 MTND5P22-201ENST00000458380 195 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 RNU7-185P-201ENST00000459215 60 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 RNU6-988P-201ENST00000519081 107 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.35□□□□□ -2.35
PHF3Q92576 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
PHF3Q92576 Y_RNA.61-201ENST00000362835 102 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 RNU6-770P-201ENST00000363929 105 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 Y_RNA.217-201ENST00000364214 105 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 RNU4-17P-201ENST00000365598 141 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 Y_RNA.376-201ENST00000365638 108 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 AC113618.1-201ENST00000416747 285 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 ELOCP20-201ENST00000422460 345 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 AC098934.3-201ENST00000430450 190 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.34□□□□□ -2.36
PHF3Q92576 Y_RNA.641-201ENST00000459414 105 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.34□□□□□ -2.36
PHF3Q92576 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.34□□□□□ -2.36
PHF3Q92576 Y_RNA.84-201ENST00000363011 104 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 RNU6-474P-201ENST00000384243 107 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 RNU7-96P-201ENST00000459535 64 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 RNU6-453P-201ENST00000516819 85 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 Y_RNA.16-201ENST00000362421 102 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 RNU5E-4P-201ENST00000364931 120 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 RNU6-1189P-201ENST00000383958 107 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 Y_RNA.509-201ENST00000384506 99 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 SNORA79-201ENST00000408376 140 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 MIR1257-201ENST00000408490 117 ntBASIC0.33□□□□□ -2.36
PHF3Q92576 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms