Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 MIR3664-201ENST00000579074 99 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 AC131055.1-201ENST00000584626 316 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
NKX6-1P78426 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NKX6-1P78426 Y_RNA.170-201ENST00000363746 110 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 MIR499A-201ENST00000384903 122 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 RPS27P16-201ENST00000425758 201 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 RNU7-67P-201ENST00000459003 62 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 RNU7-80P-201ENST00000459562 61 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 AC008133.2-201ENST00000624540 351 ntBASIC1.63□□□□□ -2.15
NKX6-1P78426 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.63□□□□□ -2.15
NKX6-1P78426 Y_RNA.351-201ENST00000365436 96 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 SNORD18B-201ENST00000365659 72 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 RNU6-1336P-201ENST00000383886 109 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 Y_RNA.440-201ENST00000384120 114 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 Y_RNA.454-201ENST00000384224 113 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 SNORA51.10-201ENST00000384418 136 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NKX6-1P78426 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.62□□□□□ -2.15
NKX6-1P78426 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 RPS29P29-201ENST00000456396 171 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 RNU7-96P-201ENST00000459535 64 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 RPS29P24-201ENST00000486345 171 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 MIR4791-201ENST00000607666 84 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.62□□□□□ -2.15
NKX6-1P78426 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NKX6-1P78426 RNA5SP48-201ENST00000363969 126 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 SNORA25.9-201ENST00000365087 128 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 Y_RNA.584-201ENST00000391090 114 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 RNU7-200P-201ENST00000516105 62 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 RN7SKP88-201ENST00000516847 250 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 RNU6-255P-201ENST00000516957 105 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 MTND5P41-201ENST00000517498 206 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.61□□□□□ -2.15
NKX6-1P78426 MIR548X2-201ENST00000579776 100 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 7SK.8-201ENST00000612110 250 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 7SK.11-201ENST00000615477 250 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 AC243994.1-201ENST00000618627 109 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 7SK.13-201ENST00000622040 250 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
NKX6-1P78426 Y_RNA.215-201ENST00000364204 112 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 RNY1P5-201ENST00000383890 115 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 MIR518E-201ENST00000385252 88 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 MTATP6P21-201ENST00000440681 189 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 RNU7-53P-201ENST00000516705 60 ntBASIC1.6□□□□□ -2.15
NKX6-1P78426 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NKX6-1P78426 MIR302B-201ENST00000362188 73 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 Y_RNA.488-201ENST00000384403 102 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 Y_RNA.497-201ENST00000384447 98 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 MIR570-201ENST00000384917 97 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 AL035398.1-201ENST00000430869 322 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 RNU2-13P-201ENST00000515909 113 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 RNU6-958P-201ENST00000516995 106 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 AP001485.1-201ENST00000604799 199 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
NKX6-1P78426 MIR342-201ENST00000362212 99 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 Y_RNA.52-201ENST00000362760 96 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 Y_RNA.116-201ENST00000363292 103 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 Y_RNA.343-201ENST00000365354 112 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 Y_RNA.494-201ENST00000384432 111 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 MIR7-2-201ENST00000384970 110 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 AP1B1P2-201ENST00000416196 106 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 AL133373.1-201ENST00000497098 94 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 RNU7-41P-201ENST00000515917 61 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 RNU6-1149P-201ENST00000516810 97 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.58□□□□□ -2.16
NKX6-1P78426 AL096861.1-201ENST00000610899 123 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 MIR376A2-201ENST00000636782 80 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 MTND5P32-201ENST00000560711 1802 ntBASIC1.58□□□□□ -2.16
NKX6-1P78426 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
NKX6-1P78426 SNORA24-201ENST00000384096 131 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 snoU13.16-201ENST00000459350 104 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 snoU13.18-201ENST00000459483 104 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 RNU6-998P-201ENST00000515894 101 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 SNORA25.12-201ENST00000516202 82 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
NKX6-1P78426 RNU1-133P-201ENST00000364867 167 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 MIR548M-201ENST00000408260 86 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
NKX6-1P78426 SCARNA15-202ENST00000516881 127 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 MIR3192-201ENST00000584920 77 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.56□□□□□ -2.16
NKX6-1P78426 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NKX6-1P78426 AL596211.1-201ENST00000569873 2277 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms